Protein–RNA interactions for Protein: P28222

HTR1B, 5-hydroxytryptamine receptor 1B, humanhuman

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1BP28222 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.96■□□□□ 0.47
HTR1BP28222 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1BP28222 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
HTR1BP28222 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
HTR1BP28222 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1BP28222 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1BP28222 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.96■□□□□ 0.47
HTR1BP28222 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1BP28222 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1BP28222 TSPY12P-201ENST00000421279 868 ntBASIC17.96■□□□□ 0.47
HTR1BP28222 KRT17P6-201ENST00000453795 1220 ntBASIC17.96■□□□□ 0.47
HTR1BP28222 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.96■□□□□ 0.47
HTR1BP28222 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1BP28222 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.96■□□□□ 0.47
HTR1BP28222 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.96■□□□□ 0.47
HTR1BP28222 AC091304.2-201ENST00000564639 760 ntBASIC17.96■□□□□ 0.47
HTR1BP28222 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.96■□□□□ 0.47
HTR1BP28222 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.96■□□□□ 0.47
HTR1BP28222 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.96■□□□□ 0.47
HTR1BP28222 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
HTR1BP28222 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.96■□□□□ 0.47
HTR1BP28222 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1BP28222 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1BP28222 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
HTR1BP28222 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.96■□□□□ 0.47
HTR1BP28222 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1BP28222 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
HTR1BP28222 LINC00167-201ENST00000530583 1419 ntBASIC17.96■□□□□ 0.47
HTR1BP28222 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
HTR1BP28222 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
HTR1BP28222 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.95■□□□□ 0.46
HTR1BP28222 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.95■□□□□ 0.46
HTR1BP28222 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.95■□□□□ 0.46
HTR1BP28222 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 AC004870.1-201ENST00000315132 882 ntBASIC17.95■□□□□ 0.46
HTR1BP28222 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
HTR1BP28222 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.95■□□□□ 0.46
HTR1BP28222 FOSL1P1-201ENST00000511041 816 ntBASIC17.95■□□□□ 0.46
HTR1BP28222 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.95■□□□□ 0.46
HTR1BP28222 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.95■□□□□ 0.46
HTR1BP28222 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.95■□□□□ 0.46
HTR1BP28222 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.95■□□□□ 0.46
HTR1BP28222 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
HTR1BP28222 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 AC020763.4-201ENST00000623414 4170 ntBASIC17.95■□□□□ 0.46
HTR1BP28222 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
HTR1BP28222 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
HTR1BP28222 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
HTR1BP28222 AL024508.2-201ENST00000607749 1894 ntBASIC17.95■□□□□ 0.46
HTR1BP28222 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.94■□□□□ 0.46
HTR1BP28222 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HTR1BP28222 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.94■□□□□ 0.46
HTR1BP28222 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HTR1BP28222 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.94■□□□□ 0.46
HTR1BP28222 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.94■□□□□ 0.46
HTR1BP28222 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
HTR1BP28222 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.94■□□□□ 0.46
HTR1BP28222 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
HTR1BP28222 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
HTR1BP28222 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.94■□□□□ 0.46
HTR1BP28222 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.94■□□□□ 0.46
HTR1BP28222 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HTR1BP28222 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HTR1BP28222 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
HTR1BP28222 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.94■□□□□ 0.46
HTR1BP28222 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
HTR1BP28222 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
HTR1BP28222 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
HTR1BP28222 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HTR1BP28222 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HTR1BP28222 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HTR1BP28222 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
HTR1BP28222 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
HTR1BP28222 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms