Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.02■□□□□ 0.32
PLOD3O60568 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.02■□□□□ 0.32
PLOD3O60568 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PLOD3O60568 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PLOD3O60568 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PLOD3O60568 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PLOD3O60568 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PLOD3O60568 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PLOD3O60568 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PLOD3O60568 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
PLOD3O60568 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PLOD3O60568 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PLOD3O60568 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PLOD3O60568 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.01■□□□□ 0.31
PLOD3O60568 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PLOD3O60568 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.01■□□□□ 0.31
PLOD3O60568 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PLOD3O60568 AC093010.1-201ENST00000473625 1624 ntBASIC17.01■□□□□ 0.31
PLOD3O60568 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PLOD3O60568 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PLOD3O60568 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PLOD3O60568 RCN1P1-201ENST00000400413 996 ntBASIC17.01■□□□□ 0.31
PLOD3O60568 AK4P3-201ENST00000418260 669 ntBASIC17.01■□□□□ 0.31
PLOD3O60568 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PLOD3O60568 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PLOD3O60568 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PLOD3O60568 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PLOD3O60568 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.01■□□□□ 0.31
PLOD3O60568 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PLOD3O60568 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PLOD3O60568 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PLOD3O60568 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PLOD3O60568 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
PLOD3O60568 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PLOD3O60568 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PLOD3O60568 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
PLOD3O60568 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17■□□□□ 0.31
PLOD3O60568 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17■□□□□ 0.31
PLOD3O60568 SPDYE15P-201ENST00000424157 909 ntBASIC17■□□□□ 0.31
PLOD3O60568 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17■□□□□ 0.31
PLOD3O60568 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17■□□□□ 0.31
PLOD3O60568 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17■□□□□ 0.31
PLOD3O60568 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17■□□□□ 0.31
PLOD3O60568 REXO1L9P-201ENST00000604264 2108 ntBASIC17■□□□□ 0.31
PLOD3O60568 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17■□□□□ 0.31
PLOD3O60568 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PLOD3O60568 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PLOD3O60568 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PLOD3O60568 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PLOD3O60568 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 AL391807.1-203ENST00000604392 2365 ntBASIC16.99■□□□□ 0.31
PLOD3O60568 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.99■□□□□ 0.31
PLOD3O60568 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PLOD3O60568 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.99■□□□□ 0.31
PLOD3O60568 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
PLOD3O60568 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 HLA-F-220ENST00000434407 884 ntBASIC16.99■□□□□ 0.31
PLOD3O60568 AC104076.2-201ENST00000448912 469 ntBASIC16.99■□□□□ 0.31
PLOD3O60568 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.99■□□□□ 0.31
PLOD3O60568 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.99■□□□□ 0.31
PLOD3O60568 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.99■□□□□ 0.31
PLOD3O60568 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 AL136038.4-201ENST00000603606 1261 ntBASIC16.99■□□□□ 0.31
PLOD3O60568 AC079602.3-201ENST00000623931 403 ntBASIC16.99■□□□□ 0.31
PLOD3O60568 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
PLOD3O60568 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PLOD3O60568 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
PLOD3O60568 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PLOD3O60568 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms