Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 AC092647.4-201ENST00000457211 535 ntBASIC16.88■□□□□ 0.29
CLCA1A8K7I4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.88■□□□□ 0.29
CLCA1A8K7I4 GPAT2P1-201ENST00000444924 1672 ntBASIC16.88■□□□□ 0.29
CLCA1A8K7I4 KRT8P3-201ENST00000519669 1449 ntBASIC16.87■□□□□ 0.29
CLCA1A8K7I4 AC112777.1-201ENST00000540175 1423 ntBASIC16.87■□□□□ 0.29
CLCA1A8K7I4 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 REXO1L9P-201ENST00000604264 2108 ntBASIC16.87■□□□□ 0.29
CLCA1A8K7I4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 AP000523.1-201ENST00000398242 1049 ntBASIC16.87■□□□□ 0.29
CLCA1A8K7I4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 CR769767.2-201ENST00000622735 460 ntBASIC16.87■□□□□ 0.29
CLCA1A8K7I4 AC068587.9-201ENST00000641814 219 ntBASIC16.87■□□□□ 0.29
CLCA1A8K7I4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLCA1A8K7I4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLCA1A8K7I4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms