Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-4A0A0C4DH59 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.74■□□□□ 0.43
TRBV5-4A0A0C4DH59 AL133373.2-201ENST00000623187 2828 ntBASIC17.74■□□□□ 0.43
TRBV5-4A0A0C4DH59 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRBV5-4A0A0C4DH59 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRBV5-4A0A0C4DH59 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 AP002383.4-201ENST00000442518 975 ntBASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 TSSC2-201ENST00000450217 709 ntBASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 IGHV3-41-201ENST00000613121 348 ntBASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRBV5-4A0A0C4DH59 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 AC018470.1-201ENST00000624790 3129 ntBASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 DDX43P3-201ENST00000441064 443 ntBASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 AC116407.2-201ENST00000613639 860 ntBASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.72■□□□□ 0.43
TRBV5-4A0A0C4DH59 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 AC096633.1-201ENST00000422446 749 ntBASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 AC246785.2-201ENST00000432512 513 ntBASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 NPAP1P7-201ENST00000613027 823 ntBASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TRBV5-4A0A0C4DH59 AC097374.2-201ENST00000618617 1306 ntBASIC17.71■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms