Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.43■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.43■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 LINC00167-201ENST00000530583 1419 ntBASIC16.43■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.43■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.43■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 IGHGP-201ENST00000390555 1178 ntBASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AC011498.5-201ENST00000592027 486 ntBASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AC138028.4-201ENST00000564984 1845 ntBASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 LINC00602-201ENST00000629776 2065 ntBASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AC132938.6-201ENST00000623828 1655 ntBASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 ATP5G2P1-201ENST00000433580 426 ntBASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 HCG4P8-203ENST00000443049 980 ntBASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 DUTP2-201ENST00000519164 463 ntBASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 GPR32P1-201ENST00000601788 811 ntBASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AC004263.2-201ENST00000617183 678 ntBASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TNFSF12-TNFSF13A0A0A6YY99 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms