Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 PHGDH-209ENST00000641074 1780 ntBASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB9Q9Y5E1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB9Q9Y5E1 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 IGHGP-201ENST00000390555 1178 ntBASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 AC012615.1-201ENST00000565797 1299 ntBASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 AC005332.3-201ENST00000589904 676 ntBASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 Z83836.1-201ENST00000624605 1642 ntBASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 AC093677.2-201ENST00000600169 1863 ntBASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB9Q9Y5E1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 AC104692.2-201ENST00000603054 253 ntBASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHB9Q9Y5E1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 DRAXINP1-201ENST00000437611 948 ntBASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 AC079781.3-201ENST00000449110 356 ntBASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 AC104819.1-201ENST00000504587 486 ntBASIC18.31■□□□□ 0.52
PCDHB9Q9Y5E1 KRT18P31-201ENST00000506277 1292 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms