Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CISHQ9NSE2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.26■□□□□ 0.67
CISHQ9NSE2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CISHQ9NSE2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CISHQ9NSE2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CISHQ9NSE2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.26■□□□□ 0.67
CISHQ9NSE2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
CISHQ9NSE2 AP000550.4-202ENST00000639755 178 ntBASIC19.26■□□□□ 0.67
CISHQ9NSE2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CISHQ9NSE2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CISHQ9NSE2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CISHQ9NSE2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CISHQ9NSE2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CISHQ9NSE2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.26■□□□□ 0.67
CISHQ9NSE2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.26■□□□□ 0.67
CISHQ9NSE2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CISHQ9NSE2 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CISHQ9NSE2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.26■□□□□ 0.67
CISHQ9NSE2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 KRT8P26-201ENST00000534154 1276 ntBASIC19.25■□□□□ 0.67
CISHQ9NSE2 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.25■□□□□ 0.67
CISHQ9NSE2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CISHQ9NSE2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CISHQ9NSE2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CISHQ9NSE2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
CISHQ9NSE2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.24■□□□□ 0.67
CISHQ9NSE2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.24■□□□□ 0.67
CISHQ9NSE2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.24■□□□□ 0.67
CISHQ9NSE2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.24■□□□□ 0.67
CISHQ9NSE2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.24■□□□□ 0.67
CISHQ9NSE2 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.24■□□□□ 0.67
CISHQ9NSE2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.24■□□□□ 0.67
CISHQ9NSE2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.24■□□□□ 0.67
CISHQ9NSE2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CISHQ9NSE2 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CISHQ9NSE2 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CISHQ9NSE2 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CISHQ9NSE2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CISHQ9NSE2 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 BX276092.5-203ENST00000456199 560 ntBASIC19.23■□□□□ 0.67
CISHQ9NSE2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CISHQ9NSE2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms