Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NEUROD4Q9HD90 NFIC-211ENST00000641145 8399 ntBASIC17.08■□□□□ 0.33
NEUROD4Q9HD90 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NEUROD4Q9HD90 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
NEUROD4Q9HD90 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.08■□□□□ 0.33
NEUROD4Q9HD90 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NEUROD4Q9HD90 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NEUROD4Q9HD90 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NEUROD4Q9HD90 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.08■□□□□ 0.33
NEUROD4Q9HD90 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NEUROD4Q9HD90 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NEUROD4Q9HD90 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.08■□□□□ 0.33
NEUROD4Q9HD90 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 LINC01568-207ENST00000641790 1380 ntBASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
NEUROD4Q9HD90 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.07■□□□□ 0.32
NEUROD4Q9HD90 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 AC113347.1-201ENST00000413321 391 ntBASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 PVRIG2P-201ENST00000435460 978 ntBASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 DUTP2-201ENST00000519164 463 ntBASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NEUROD4Q9HD90 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms