Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 AC067852.2-201ENST00000590513 2313 ntBASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 UPK3BP1-201ENST00000428678 509 ntBASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 AC091076.1-201ENST00000610741 619 ntBASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 FLJ13224-201ENST00000313737 1514 ntBASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SEMA6DQ8NFY4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 SLC25A6P5-201ENST00000435663 894 ntBASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 LINC01238-205ENST00000567549 1107 ntBASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 MIR3180-4-201ENST00000582223 153 ntBASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 FAM87A-204ENST00000613235 858 ntBASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SEMA6DQ8NFY4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 AC020916.1-201ENST00000587762 1774 ntBASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 AK4P3-201ENST00000418260 669 ntBASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 BX664615.1-201ENST00000443558 458 ntBASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 AC063952.2-201ENST00000498792 1227 ntBASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 AC104390.1-201ENST00000555663 520 ntBASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SEMA6DQ8NFY4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms