Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC28.06■■■□□ 2.08
CFAP43Q8NDM7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 BX323043.1-201ENST00000641006 1765 ntBASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC28.05■■■□□ 2.08
CFAP43Q8NDM7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 PHGDH-209ENST00000641074 1780 ntBASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
CFAP43Q8NDM7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 AC011467.4-201ENST00000594891 528 ntBASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
CFAP43Q8NDM7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 AC108751.1-201ENST00000490852 363 ntBASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CFAP43Q8NDM7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC28.01■■■□□ 2.08
CFAP43Q8NDM7 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 AC073621.1-201ENST00000392730 636 ntBASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CFAP43Q8NDM7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms