Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.68■□□□□ 0.58
PHTF2Q8N3S3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 AL160237.2-201ENST00000556165 472 ntBASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PHTF2Q8N3S3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 AKR1C7P-201ENST00000305623 895 ntBASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 KRT16P4-201ENST00000453883 522 ntBASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 AC113404.2-201ENST00000507884 177 ntBASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 NOC2LP2-201ENST00000407594 1944 ntBASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHTF2Q8N3S3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 AC009102.3-201ENST00000623118 1491 ntBASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 AC068880.1-201ENST00000507289 2297 ntBASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PHTF2Q8N3S3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHTF2Q8N3S3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHTF2Q8N3S3 SDHAP2-201ENST00000455183 2001 ntBASIC18.64■□□□□ 0.58
PHTF2Q8N3S3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.64■□□□□ 0.58
PHTF2Q8N3S3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms