Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 ABCD1P5-201ENST00000445663 754 ntBASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
OTOP1Q7RTM1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
OTOP1Q7RTM1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
OTOP1Q7RTM1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
OTOP1Q7RTM1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
OTOP1Q7RTM1 TNXA-203ENST00000507684 2038 ntBASIC20.83■□□□□ 0.92
OTOP1Q7RTM1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
OTOP1Q7RTM1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
OTOP1Q7RTM1 AC087289.5-201ENST00000586076 3175 ntBASIC20.83■□□□□ 0.92
OTOP1Q7RTM1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 AL645939.2-201ENST00000427340 991 ntBASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 AC009947.1-201ENST00000444350 727 ntBASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 AC011467.2-201ENST00000598425 242 ntBASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
OTOP1Q7RTM1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 YBX1P5-201ENST00000509441 847 ntBASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 AC005829.1-201ENST00000570002 483 ntBASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 AL163051.1-201ENST00000569214 1512 ntBASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
OTOP1Q7RTM1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
OTOP1Q7RTM1 MYLKP1-201ENST00000509077 1580 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms