Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RNF43Q68DV7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF43Q68DV7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RNF43Q68DV7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF43Q68DV7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 FAAHP1-202ENST00000446499 1238 ntBASIC18.94■□□□□ 0.62
RNF43Q68DV7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF43Q68DV7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RNF43Q68DV7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF43Q68DV7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RNF43Q68DV7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF43Q68DV7 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF43Q68DV7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF43Q68DV7 ANO7L1-203ENST00000602586 1720 ntBASIC18.94■□□□□ 0.62
RNF43Q68DV7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF43Q68DV7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF43Q68DV7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RNF43Q68DV7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNF43Q68DV7 KRT17P6-201ENST00000453795 1220 ntBASIC18.93■□□□□ 0.62
RNF43Q68DV7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF43Q68DV7 AC009065.1-201ENST00000564055 1225 ntBASIC18.93■□□□□ 0.62
RNF43Q68DV7 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF43Q68DV7 AC011498.5-201ENST00000592027 486 ntBASIC18.93■□□□□ 0.62
RNF43Q68DV7 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNF43Q68DV7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF43Q68DV7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 AL163051.1-201ENST00000569214 1512 ntBASIC18.93■□□□□ 0.62
RNF43Q68DV7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF43Q68DV7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RNF43Q68DV7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF43Q68DV7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 AC006538.3-201ENST00000612495 578 ntBASIC18.92■□□□□ 0.62
RNF43Q68DV7 AC023511.2-201ENST00000618803 211 ntBASIC18.92■□□□□ 0.62
RNF43Q68DV7 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF43Q68DV7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF43Q68DV7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms