Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.58■□□□□ 0.4
SNAP47Q5SQN1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.58■□□□□ 0.4
SNAP47Q5SQN1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNAP47Q5SQN1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNAP47Q5SQN1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.58■□□□□ 0.4
SNAP47Q5SQN1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNAP47Q5SQN1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNAP47Q5SQN1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.58■□□□□ 0.4
SNAP47Q5SQN1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNAP47Q5SQN1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNAP47Q5SQN1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 AC093503.3-201ENST00000624917 2352 ntBASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 MIR149-201ENST00000384879 89 ntBASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 EMBP1-201ENST00000458200 901 ntBASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 VENTXP7-201ENST00000475503 772 ntBASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
SNAP47Q5SQN1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 TSPY19P-201ENST00000418461 509 ntBASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 TSPY18P-201ENST00000441642 509 ntBASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 KRT17P6-201ENST00000453795 1220 ntBASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 MYLKP1-201ENST00000509077 1580 ntBASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.56■□□□□ 0.4
SNAP47Q5SQN1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 KRT18P31-201ENST00000506277 1292 ntBASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 AC011840.4-201ENST00000578471 627 ntBASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNAP47Q5SQN1 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms