Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN5P54829 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPN5P54829 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PTPN5P54829 AL357033.4-201ENST00000617703 1807 ntBASIC18.63■□□□□ 0.57
PTPN5P54829 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN5P54829 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PTPN5P54829 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN5P54829 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN5P54829 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PTPN5P54829 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN5P54829 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN5P54829 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN5P54829 AC092910.1-201ENST00000482027 1129 ntBASIC18.62■□□□□ 0.57
PTPN5P54829 RNA5SP415-201ENST00000517246 115 ntBASIC18.62■□□□□ 0.57
PTPN5P54829 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.62■□□□□ 0.57
PTPN5P54829 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN5P54829 AC010240.3-201ENST00000607688 395 ntBASIC18.62■□□□□ 0.57
PTPN5P54829 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN5P54829 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PTPN5P54829 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.62■□□□□ 0.57
PTPN5P54829 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTPN5P54829 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN5P54829 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN5P54829 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PTPN5P54829 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN5P54829 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.62■□□□□ 0.57
PTPN5P54829 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PTPN5P54829 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PTPN5P54829 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN5P54829 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PTPN5P54829 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.61■□□□□ 0.57
PTPN5P54829 AC034236.2-201ENST00000606662 1610 ntBASIC18.61■□□□□ 0.57
PTPN5P54829 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 AC112777.1-201ENST00000540175 1423 ntBASIC18.61■□□□□ 0.57
PTPN5P54829 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 PAWRP1-201ENST00000451083 565 ntBASIC18.61■□□□□ 0.57
PTPN5P54829 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPN5P54829 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.61■□□□□ 0.57
PTPN5P54829 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.61■□□□□ 0.57
PTPN5P54829 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PTPN5P54829 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.61■□□□□ 0.57
PTPN5P54829 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
PTPN5P54829 AL138781.2-201ENST00000617896 1843 ntBASIC18.6■□□□□ 0.57
PTPN5P54829 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PTPN5P54829 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PTPN5P54829 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PTPN5P54829 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN5P54829 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN5P54829 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN5P54829 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN5P54829 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN5P54829 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.6■□□□□ 0.57
PTPN5P54829 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PTPN5P54829 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN5P54829 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PTPN5P54829 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN5P54829 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN5P54829 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.6■□□□□ 0.57
PTPN5P54829 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN5P54829 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN5P54829 SPCS2P1-201ENST00000561636 679 ntBASIC18.6■□□□□ 0.57
PTPN5P54829 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN5P54829 AP001269.4-201ENST00000609611 512 ntBASIC18.6■□□□□ 0.57
PTPN5P54829 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN5P54829 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN5P54829 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.6■□□□□ 0.57
PTPN5P54829 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PTPN5P54829 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN5P54829 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
PTPN5P54829 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN5P54829 HOXB1-202ENST00000577092 1414 ntBASIC18.59■□□□□ 0.57
PTPN5P54829 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN5P54829 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
PTPN5P54829 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN5P54829 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN5P54829 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN5P54829 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PTPN5P54829 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN5P54829 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PTPN5P54829 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN5P54829 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.59■□□□□ 0.57
PTPN5P54829 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PTPN5P54829 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PTPN5P54829 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms