Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
MSI1O43347 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MSI1O43347 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.74■□□□□ 0.59
MSI1O43347 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.74■□□□□ 0.59
MSI1O43347 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.74■□□□□ 0.59
MSI1O43347 DUSP5P1-201ENST00000441325 1139 ntBASIC18.74■□□□□ 0.59
MSI1O43347 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.74■□□□□ 0.59
MSI1O43347 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.74■□□□□ 0.59
MSI1O43347 AC011840.4-201ENST00000578471 627 ntBASIC18.74■□□□□ 0.59
MSI1O43347 MIR3652-201ENST00000579335 131 ntBASIC18.74■□□□□ 0.59
MSI1O43347 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.74■□□□□ 0.59
MSI1O43347 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
MSI1O43347 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MSI1O43347 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
MSI1O43347 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.74■□□□□ 0.59
MSI1O43347 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MSI1O43347 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.74■□□□□ 0.59
MSI1O43347 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.73■□□□□ 0.59
MSI1O43347 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.73■□□□□ 0.59
MSI1O43347 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.73■□□□□ 0.59
MSI1O43347 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.73■□□□□ 0.59
MSI1O43347 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MSI1O43347 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.73■□□□□ 0.59
MSI1O43347 MTCL1P1-201ENST00000446207 792 ntBASIC18.73■□□□□ 0.59
MSI1O43347 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.73■□□□□ 0.59
MSI1O43347 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
MSI1O43347 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.73■□□□□ 0.59
MSI1O43347 AC074051.2-201ENST00000565115 352 ntBASIC18.73■□□□□ 0.59
MSI1O43347 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.73■□□□□ 0.59
MSI1O43347 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.73■□□□□ 0.59
MSI1O43347 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
MSI1O43347 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.73■□□□□ 0.59
MSI1O43347 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.73■□□□□ 0.59
MSI1O43347 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.73■□□□□ 0.59
MSI1O43347 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
MSI1O43347 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
MSI1O43347 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
MSI1O43347 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.72■□□□□ 0.59
MSI1O43347 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.72■□□□□ 0.59
MSI1O43347 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.72■□□□□ 0.59
MSI1O43347 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.72■□□□□ 0.59
MSI1O43347 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.72■□□□□ 0.59
MSI1O43347 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.72■□□□□ 0.59
MSI1O43347 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.72■□□□□ 0.59
MSI1O43347 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.72■□□□□ 0.59
MSI1O43347 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.72■□□□□ 0.59
MSI1O43347 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
MSI1O43347 BICD1-207ENST00000551848 1962 ntBASIC18.72■□□□□ 0.59
MSI1O43347 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.71■□□□□ 0.59
MSI1O43347 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSI1O43347 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.71■□□□□ 0.59
MSI1O43347 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MSI1O43347 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MSI1O43347 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
MSI1O43347 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms