Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.88□□□□□ -0.19
NDUFA4O00483 DUX4L26-201ENST00000489078 1255 ntBASIC13.88□□□□□ -0.19
NDUFA4O00483 AC022616.7-201ENST00000525383 220 ntBASIC13.88□□□□□ -0.19
NDUFA4O00483 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.88□□□□□ -0.19
NDUFA4O00483 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 LITAF-220ENST00000620789 692 ntTSL 5 BASIC13.88□□□□□ -0.19
NDUFA4O00483 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
NDUFA4O00483 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
NDUFA4O00483 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
NDUFA4O00483 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
NDUFA4O00483 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
NDUFA4O00483 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
NDUFA4O00483 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFA4O00483 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.87□□□□□ -0.19
NDUFA4O00483 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 PKD1P1-201ENST00000458669 6805 ntBASIC13.87□□□□□ -0.19
NDUFA4O00483 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC13.87□□□□□ -0.19
NDUFA4O00483 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFA4O00483 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.87□□□□□ -0.19
NDUFA4O00483 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NDUFA4O00483 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 AP000997.3-201ENST00000623333 2250 ntBASIC13.87□□□□□ -0.19
NDUFA4O00483 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
NDUFA4O00483 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NDUFA4O00483 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 KRT18P55-202ENST00000578578 1546 ntBASIC13.87□□□□□ -0.19
NDUFA4O00483 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.87□□□□□ -0.19
NDUFA4O00483 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFA4O00483 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFA4O00483 KRT18P38-201ENST00000449496 1282 ntBASIC13.87□□□□□ -0.19
NDUFA4O00483 AC092597.1-201ENST00000487352 616 ntBASIC13.87□□□□□ -0.19
NDUFA4O00483 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.87□□□□□ -0.19
NDUFA4O00483 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.87□□□□□ -0.19
NDUFA4O00483 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.87□□□□□ -0.19
NDUFA4O00483 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC13.87□□□□□ -0.19
NDUFA4O00483 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
NDUFA4O00483 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.87□□□□□ -0.19
NDUFA4O00483 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 AC132938.6-201ENST00000623828 1655 ntBASIC13.87□□□□□ -0.19
NDUFA4O00483 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC13.87□□□□□ -0.19
NDUFA4O00483 LINC00167-201ENST00000530583 1419 ntBASIC13.87□□□□□ -0.19
NDUFA4O00483 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
NDUFA4O00483 LINC01311-201ENST00000565162 1445 ntBASIC13.87□□□□□ -0.19
NDUFA4O00483 LINC00602-201ENST00000629776 2065 ntBASIC13.87□□□□□ -0.19
NDUFA4O00483 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.87□□□□□ -0.19
NDUFA4O00483 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
NDUFA4O00483 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
NDUFA4O00483 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
NDUFA4O00483 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFA4O00483 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFA4O00483 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFA4O00483 AC008764.6-201ENST00000595909 2069 ntBASIC13.86□□□□□ -0.19
NDUFA4O00483 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFA4O00483 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NDUFA4O00483 HLA-DQB1-201ENST00000374943 1656 ntBASIC13.86□□□□□ -0.19
NDUFA4O00483 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
NDUFA4O00483 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFA4O00483 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
NDUFA4O00483 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFA4O00483 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.86□□□□□ -0.19
NDUFA4O00483 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFA4O00483 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFA4O00483 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC13.86□□□□□ -0.19
NDUFA4O00483 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
NDUFA4O00483 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
NDUFA4O00483 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms