Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 SLC25A6P5-201ENST00000435663 894 ntBASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 AC008687.5-201ENST00000593746 558 ntBASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 LINC01126-201ENST00000623515 1646 ntBASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 AL024508.2-201ENST00000607749 1894 ntBASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 AC012313.1-201ENST00000593393 3059 ntBASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PCDHGA11Q9Y5H2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 AL031432.5-201ENST00000641059 760 ntBASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PCDHGA11Q9Y5H2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 ATP5G1P1-201ENST00000448724 379 ntBASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 AC133561.5-201ENST00000635547 218 ntBASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 AC093010.1-201ENST00000473625 1624 ntBASIC17.54■□□□□ 0.4
PCDHGA11Q9Y5H2 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms