Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 RCN1P2-201ENST00000398357 915 ntBASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 AC005336.2-201ENST00000593183 939 ntBASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
NCKAP1Q9Y2A7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 GMCL1P1-201ENST00000463439 1581 ntBASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 MRPL3P1-201ENST00000400109 1033 ntBASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 FAM197Y8-203ENST00000450145 560 ntBASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.09■□□□□ 0.49
NCKAP1Q9Y2A7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NCKAP1Q9Y2A7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NCKAP1Q9Y2A7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.08■□□□□ 0.49
NCKAP1Q9Y2A7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.08■□□□□ 0.49
NCKAP1Q9Y2A7 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.08■□□□□ 0.49
NCKAP1Q9Y2A7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.49
NCKAP1Q9Y2A7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
NCKAP1Q9Y2A7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NCKAP1Q9Y2A7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.08■□□□□ 0.49
NCKAP1Q9Y2A7 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 AF186996.4-201ENST00000467186 377 ntBASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 AC008608.2-201ENST00000606089 416 ntBASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
NCKAP1Q9Y2A7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 BX323043.1-201ENST00000641006 1765 ntBASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1Q9Y2A7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms