Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NPAP1Q9NZP6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAP1Q9NZP6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAP1Q9NZP6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NPAP1Q9NZP6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAP1Q9NZP6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NPAP1Q9NZP6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.5■□□□□ 0.23
NPAP1Q9NZP6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NPAP1Q9NZP6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAP1Q9NZP6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAP1Q9NZP6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 WWOX-216ENST00000569818 525 ntBASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 AC139887.4-201ENST00000607877 719 ntBASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 AC141257.4-201ENST00000634557 245 ntBASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 AC136944.6-201ENST00000634818 245 ntBASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.49■□□□□ 0.23
NPAP1Q9NZP6 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 AK4P3-201ENST00000418260 669 ntBASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 AC008622.2-201ENST00000617006 1229 ntBASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 LINC01126-201ENST00000623515 1646 ntBASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
NPAP1Q9NZP6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAP1Q9NZP6 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.47■□□□□ 0.23
NPAP1Q9NZP6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.47■□□□□ 0.23
NPAP1Q9NZP6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NPAP1Q9NZP6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms