Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
CDC42SE1Q9NRR8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 IRX1P1-201ENST00000438849 1838 ntBASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
CDC42SE1Q9NRR8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
CDC42SE1Q9NRR8 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms