Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
VRK1Q99986 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.99■□□□□ 0.15
VRK1Q99986 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.99■□□□□ 0.15
VRK1Q99986 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
VRK1Q99986 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
VRK1Q99986 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VRK1Q99986 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.98■□□□□ 0.15
VRK1Q99986 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VRK1Q99986 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.98■□□□□ 0.15
VRK1Q99986 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.98■□□□□ 0.15
VRK1Q99986 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.98■□□□□ 0.15
VRK1Q99986 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.98■□□□□ 0.15
VRK1Q99986 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
VRK1Q99986 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK1Q99986 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VRK1Q99986 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK1Q99986 PCED1CP-201ENST00000419887 785 ntBASIC15.98■□□□□ 0.15
VRK1Q99986 KRT18P38-201ENST00000449496 1282 ntBASIC15.98■□□□□ 0.15
VRK1Q99986 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.98■□□□□ 0.15
VRK1Q99986 MIR3180-5-201ENST00000583743 153 ntBASIC15.98■□□□□ 0.15
VRK1Q99986 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.98■□□□□ 0.15
VRK1Q99986 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
VRK1Q99986 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.98■□□□□ 0.15
VRK1Q99986 AC024243.1-201ENST00000609234 778 ntBASIC15.98■□□□□ 0.15
VRK1Q99986 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
VRK1Q99986 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.98■□□□□ 0.15
VRK1Q99986 AL121956.5-201ENST00000625261 221 ntBASIC15.98■□□□□ 0.15
VRK1Q99986 FP475955.4-201ENST00000623131 1990 ntBASIC15.98■□□□□ 0.15
VRK1Q99986 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
VRK1Q99986 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK1Q99986 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK1Q99986 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK1Q99986 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
VRK1Q99986 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
VRK1Q99986 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
VRK1Q99986 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
VRK1Q99986 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.97■□□□□ 0.15
VRK1Q99986 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.97■□□□□ 0.15
VRK1Q99986 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.97■□□□□ 0.15
VRK1Q99986 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.97■□□□□ 0.15
VRK1Q99986 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 AP000550.4-202ENST00000639755 178 ntBASIC15.97■□□□□ 0.15
VRK1Q99986 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.97■□□□□ 0.15
VRK1Q99986 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.97■□□□□ 0.15
VRK1Q99986 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
VRK1Q99986 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.97■□□□□ 0.15
VRK1Q99986 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.96■□□□□ 0.15
VRK1Q99986 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
VRK1Q99986 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
VRK1Q99986 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.96■□□□□ 0.15
VRK1Q99986 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
VRK1Q99986 ABALON-201ENST00000629058 1903 ntBASIC15.96■□□□□ 0.15
VRK1Q99986 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
VRK1Q99986 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.96■□□□□ 0.15
VRK1Q99986 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
VRK1Q99986 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms