Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 AC126763.1-201ENST00000552015 2118 ntBASIC13.7□□□□□ -0.22
AP1S3Q96PC3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 AC004911.1-201ENST00000416316 871 ntBASIC13.69□□□□□ -0.22
AP1S3Q96PC3 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 AL121829.2-201ENST00000620908 328 ntBASIC13.69□□□□□ -0.22
AP1S3Q96PC3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
AP1S3Q96PC3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.68□□□□□ -0.22
AP1S3Q96PC3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 AC018695.7-201ENST00000624587 2492 ntBASIC13.68□□□□□ -0.22
AP1S3Q96PC3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.68□□□□□ -0.22
AP1S3Q96PC3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 MIR663A-201ENST00000385250 93 ntBASIC13.68□□□□□ -0.22
AP1S3Q96PC3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 AC092118.2-201ENST00000613495 667 ntBASIC13.68□□□□□ -0.22
AP1S3Q96PC3 HLA-B-256ENST00000639848 1089 ntBASIC13.68□□□□□ -0.22
AP1S3Q96PC3 MYC-208ENST00000641036 567 ntBASIC13.68□□□□□ -0.22
AP1S3Q96PC3 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC13.68□□□□□ -0.22
AP1S3Q96PC3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
AP1S3Q96PC3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms