Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 IER3-202ENST00000376377 1350 ntBASIC18.66■□□□□ 0.58
IFT43Q96FT9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
IFT43Q96FT9 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 AL354751.1-201ENST00000412768 1863 ntBASIC18.65■□□□□ 0.58
IFT43Q96FT9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 AC116407.4-201ENST00000623319 1061 ntBASIC18.65■□□□□ 0.58
IFT43Q96FT9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 PKD1P1-201ENST00000458669 6805 ntBASIC18.65■□□□□ 0.58
IFT43Q96FT9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
IFT43Q96FT9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IFT43Q96FT9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IFT43Q96FT9 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
IFT43Q96FT9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.64■□□□□ 0.57
IFT43Q96FT9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.64■□□□□ 0.57
IFT43Q96FT9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
IFT43Q96FT9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.64■□□□□ 0.57
IFT43Q96FT9 KRT18P38-201ENST00000449496 1282 ntBASIC18.64■□□□□ 0.57
IFT43Q96FT9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.64■□□□□ 0.57
IFT43Q96FT9 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.64■□□□□ 0.57
IFT43Q96FT9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.64■□□□□ 0.57
IFT43Q96FT9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.64■□□□□ 0.57
IFT43Q96FT9 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.64■□□□□ 0.57
IFT43Q96FT9 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
IFT43Q96FT9 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
IFT43Q96FT9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
IFT43Q96FT9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
IFT43Q96FT9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 MIR149-201ENST00000384879 89 ntBASIC18.63■□□□□ 0.57
IFT43Q96FT9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 GCSHP2-201ENST00000560971 527 ntBASIC18.63■□□□□ 0.57
IFT43Q96FT9 AC010240.3-201ENST00000607688 395 ntBASIC18.63■□□□□ 0.57
IFT43Q96FT9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.63■□□□□ 0.57
IFT43Q96FT9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 AC005332.1-201ENST00000577698 1310 ntBASIC18.63■□□□□ 0.57
IFT43Q96FT9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IFT43Q96FT9 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms