Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCG3Q8WXD2 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.55■□□□□ 0.56
SCG3Q8WXD2 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.55■□□□□ 0.56
SCG3Q8WXD2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCG3Q8WXD2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCG3Q8WXD2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.55■□□□□ 0.56
SCG3Q8WXD2 AC009053.2-201ENST00000563701 2365 ntBASIC18.55■□□□□ 0.56
SCG3Q8WXD2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCG3Q8WXD2 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SCG3Q8WXD2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCG3Q8WXD2 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SCG3Q8WXD2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 AL671277.2-201ENST00000458060 996 ntBASIC18.54■□□□□ 0.56
SCG3Q8WXD2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 AP000550.4-202ENST00000639755 178 ntBASIC18.54■□□□□ 0.56
SCG3Q8WXD2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 KRT8P7-201ENST00000533003 1432 ntBASIC18.54■□□□□ 0.56
SCG3Q8WXD2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SCG3Q8WXD2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 AC034236.2-201ENST00000606662 1610 ntBASIC18.53■□□□□ 0.56
SCG3Q8WXD2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.53■□□□□ 0.56
SCG3Q8WXD2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 MIR3180-5-201ENST00000583743 153 ntBASIC18.53■□□□□ 0.56
SCG3Q8WXD2 AC008556.1-201ENST00000610908 2040 ntBASIC18.53■□□□□ 0.56
SCG3Q8WXD2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 GPAT2P1-201ENST00000444924 1672 ntBASIC18.53■□□□□ 0.56
SCG3Q8WXD2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.53■□□□□ 0.56
SCG3Q8WXD2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SCG3Q8WXD2 MYLKP1-201ENST00000509077 1580 ntBASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms