Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 PP12613-201ENST00000424958 2230 ntBASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RAB3IL1Q8TBN0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 AC141586.5-201ENST00000624546 2050 ntBASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 AC093010.1-201ENST00000473625 1624 ntBASIC18.05■□□□□ 0.48
RAB3IL1Q8TBN0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 AC008403.3-201ENST00000598924 454 ntBASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 AC069544.1-201ENST00000609399 999 ntBASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.04■□□□□ 0.48
RAB3IL1Q8TBN0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 PCDHA12-202ENST00000613593 2588 ntBASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 RNA5SP413-201ENST00000516373 109 ntBASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 AC026271.3-201ENST00000571884 352 ntBASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 AL353708.3-201ENST00000610272 989 ntBASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.03■□□□□ 0.48
RAB3IL1Q8TBN0 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.02■□□□□ 0.48
RAB3IL1Q8TBN0 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RAB3IL1Q8TBN0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms