Protein–RNA interactions for Protein: Q8N4S0

CCDC82, Coiled-coil domain-containing protein 82, humanhuman

Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC82Q8N4S0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 AC004263.2-201ENST00000617183 678 ntBASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC82Q8N4S0 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CCDC82Q8N4S0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 BCL2-203ENST00000589955 5011 ntBASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC82Q8N4S0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CCDC82Q8N4S0 AP000997.3-201ENST00000623333 2250 ntBASIC21.08■□□□□ 0.96
CCDC82Q8N4S0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC82Q8N4S0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC82Q8N4S0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC82Q8N4S0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC82Q8N4S0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC82Q8N4S0 AC132938.6-201ENST00000623828 1655 ntBASIC21.08■□□□□ 0.96
CCDC82Q8N4S0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC82Q8N4S0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.08■□□□□ 0.96
CCDC82Q8N4S0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC82Q8N4S0 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 IGHGP-201ENST00000390555 1178 ntBASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 AC011498.5-201ENST00000592027 486 ntBASIC21.07■□□□□ 0.96
CCDC82Q8N4S0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms