Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 FLJ13224-201ENST00000313737 1514 ntBASIC17.48■□□□□ 0.39
KRT78Q8N1N4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 SPDYE15P-201ENST00000424157 909 ntBASIC17.48■□□□□ 0.39
KRT78Q8N1N4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 AC024563.2-201ENST00000603282 481 ntBASIC17.48■□□□□ 0.39
KRT78Q8N1N4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 AC138028.4-201ENST00000564984 1845 ntBASIC17.48■□□□□ 0.39
KRT78Q8N1N4 AL391807.1-203ENST00000604392 2365 ntBASIC17.48■□□□□ 0.39
KRT78Q8N1N4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
KRT78Q8N1N4 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 NOC2LP1-202ENST00000452600 2235 ntBASIC17.47■□□□□ 0.39
KRT78Q8N1N4 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 LINC01238-205ENST00000567549 1107 ntBASIC17.47■□□□□ 0.39
KRT78Q8N1N4 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
KRT78Q8N1N4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 KRT89P-201ENST00000620027 1478 ntBASIC17.46■□□□□ 0.39
KRT78Q8N1N4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 RCN1P1-201ENST00000400413 996 ntBASIC17.46■□□□□ 0.39
KRT78Q8N1N4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 TMPOP1-202ENST00000424642 1267 ntBASIC17.46■□□□□ 0.39
KRT78Q8N1N4 AC104076.2-201ENST00000448912 469 ntBASIC17.46■□□□□ 0.39
KRT78Q8N1N4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 RN7SL850P-201ENST00000579959 291 ntBASIC17.46■□□□□ 0.39
KRT78Q8N1N4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 AC007613.1-201ENST00000572811 2597 ntBASIC17.46■□□□□ 0.39
KRT78Q8N1N4 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
KRT78Q8N1N4 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
KRT78Q8N1N4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.38
KRT78Q8N1N4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms