Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CROCCP3Q8IVE0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 HEIH-201ENST00000623091 1652 ntBASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CROCCP3Q8IVE0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 AC007950.2-201ENST00000615045 2347 ntBASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CROCCP3Q8IVE0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.4■□□□□ 0.22
CROCCP3Q8IVE0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms