Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 HEIH-201ENST00000623091 1652 ntBASIC17.71■□□□□ 0.43
SOX11P35716 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.71■□□□□ 0.43
SOX11P35716 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.71■□□□□ 0.43
SOX11P35716 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 AC117947.1-201ENST00000427448 529 ntBASIC17.71■□□□□ 0.43
SOX11P35716 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
SOX11P35716 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
SOX11P35716 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
SOX11P35716 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
SOX11P35716 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SOX11P35716 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.71■□□□□ 0.43
SOX11P35716 AC134043.2-201ENST00000624206 2238 ntBASIC17.71■□□□□ 0.43
SOX11P35716 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
SOX11P35716 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SOX11P35716 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
SOX11P35716 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SOX11P35716 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SOX11P35716 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
SOX11P35716 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SOX11P35716 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.7■□□□□ 0.42
SOX11P35716 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SOX11P35716 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SOX11P35716 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SOX11P35716 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.7■□□□□ 0.42
SOX11P35716 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 AK4P3-201ENST00000418260 669 ntBASIC17.7■□□□□ 0.42
SOX11P35716 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.7■□□□□ 0.42
SOX11P35716 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.7■□□□□ 0.42
SOX11P35716 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.7■□□□□ 0.42
SOX11P35716 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.7■□□□□ 0.42
SOX11P35716 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
SOX11P35716 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.7■□□□□ 0.42
SOX11P35716 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SOX11P35716 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.7■□□□□ 0.42
SOX11P35716 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.7■□□□□ 0.42
SOX11P35716 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.7■□□□□ 0.42
SOX11P35716 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
SOX11P35716 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.7■□□□□ 0.42
SOX11P35716 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SOX11P35716 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SOX11P35716 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SOX11P35716 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
SOX11P35716 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.69■□□□□ 0.42
SOX11P35716 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
SOX11P35716 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.69■□□□□ 0.42
SOX11P35716 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX11P35716 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX11P35716 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.69■□□□□ 0.42
SOX11P35716 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.69■□□□□ 0.42
SOX11P35716 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX11P35716 MTMR9LP-203ENST00000426597 1545 ntBASIC17.69■□□□□ 0.42
SOX11P35716 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.69■□□□□ 0.42
SOX11P35716 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.69■□□□□ 0.42
SOX11P35716 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX11P35716 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX11P35716 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SOX11P35716 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.69■□□□□ 0.42
SOX11P35716 AC063952.2-201ENST00000498792 1227 ntBASIC17.69■□□□□ 0.42
SOX11P35716 PRSS44-201ENST00000515154 1146 ntBASIC17.69■□□□□ 0.42
SOX11P35716 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.69■□□□□ 0.42
SOX11P35716 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.69■□□□□ 0.42
SOX11P35716 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SOX11P35716 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.69■□□□□ 0.42
SOX11P35716 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SOX11P35716 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms