Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.1■□□□□ 0.65
CHRNA3P32297 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.1■□□□□ 0.65
CHRNA3P32297 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA3P32297 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA3P32297 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA3P32297 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA3P32297 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CHRNA3P32297 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA3P32297 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.09■□□□□ 0.65
CHRNA3P32297 PHGDH-209ENST00000641074 1780 ntBASIC19.09■□□□□ 0.65
CHRNA3P32297 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA3P32297 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA3P32297 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA3P32297 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA3P32297 RNF152P1-201ENST00000397754 604 ntBASIC19.09■□□□□ 0.65
CHRNA3P32297 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.09■□□□□ 0.65
CHRNA3P32297 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.09■□□□□ 0.65
CHRNA3P32297 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.09■□□□□ 0.65
CHRNA3P32297 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.09■□□□□ 0.65
CHRNA3P32297 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.09■□□□□ 0.65
CHRNA3P32297 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.09■□□□□ 0.65
CHRNA3P32297 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.09■□□□□ 0.65
CHRNA3P32297 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.09■□□□□ 0.65
CHRNA3P32297 NTF6B-201ENST00000591913 560 ntBASIC19.09■□□□□ 0.65
CHRNA3P32297 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA3P32297 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA3P32297 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CHRNA3P32297 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA3P32297 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.09■□□□□ 0.65
CHRNA3P32297 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CHRNA3P32297 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA3P32297 SIRPAP1-201ENST00000448467 1770 ntBASIC19.09■□□□□ 0.65
CHRNA3P32297 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CHRNA3P32297 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA3P32297 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA3P32297 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA3P32297 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.08■□□□□ 0.65
CHRNA3P32297 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.08■□□□□ 0.65
CHRNA3P32297 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
CHRNA3P32297 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CHRNA3P32297 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA3P32297 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.08■□□□□ 0.65
CHRNA3P32297 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CHRNA3P32297 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.08■□□□□ 0.64
CHRNA3P32297 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA3P32297 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.08■□□□□ 0.64
CHRNA3P32297 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CHRNA3P32297 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.08■□□□□ 0.64
CHRNA3P32297 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA3P32297 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CHRNA3P32297 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.08■□□□□ 0.64
CHRNA3P32297 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.08■□□□□ 0.64
CHRNA3P32297 AC063952.2-201ENST00000498792 1227 ntBASIC19.08■□□□□ 0.64
CHRNA3P32297 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.08■□□□□ 0.64
CHRNA3P32297 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.08■□□□□ 0.64
CHRNA3P32297 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA3P32297 AC140113.3-201ENST00000605663 199 ntBASIC19.08■□□□□ 0.64
CHRNA3P32297 AC011558.1-201ENST00000623459 338 ntBASIC19.08■□□□□ 0.64
CHRNA3P32297 AL031432.5-201ENST00000641059 760 ntBASIC19.08■□□□□ 0.64
CHRNA3P32297 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.08■□□□□ 0.64
CHRNA3P32297 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
CHRNA3P32297 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CHRNA3P32297 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA3P32297 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA3P32297 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA3P32297 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA3P32297 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.08■□□□□ 0.64
CHRNA3P32297 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA3P32297 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA3P32297 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA3P32297 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.08■□□□□ 0.64
CHRNA3P32297 KRT8P50-201ENST00000562022 1438 ntBASIC19.08■□□□□ 0.64
CHRNA3P32297 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CHRNA3P32297 AC034236.2-201ENST00000606662 1610 ntBASIC19.07■□□□□ 0.64
CHRNA3P32297 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.07■□□□□ 0.64
CHRNA3P32297 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.07■□□□□ 0.64
CHRNA3P32297 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.07■□□□□ 0.64
CHRNA3P32297 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA3P32297 TSPY5P-201ENST00000426936 936 ntBASIC19.07■□□□□ 0.64
CHRNA3P32297 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.07■□□□□ 0.64
CHRNA3P32297 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CHRNA3P32297 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CHRNA3P32297 GPAT2P1-201ENST00000444924 1672 ntBASIC19.07■□□□□ 0.64
CHRNA3P32297 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CHRNA3P32297 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHRNA3P32297 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHRNA3P32297 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms