Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.08□□□□□ -0.15
RAB5AP20339 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB5AP20339 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAB5AP20339 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.08□□□□□ -0.15
RAB5AP20339 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
RAB5AP20339 PAUPAR-201ENST00000630360 2965 ntBASIC14.08□□□□□ -0.16
RAB5AP20339 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB5AP20339 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 AC104640.1-201ENST00000562617 2109 ntBASIC14.08□□□□□ -0.16
RAB5AP20339 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB5AP20339 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB5AP20339 KRT87P-202ENST00000534226 1464 ntBASIC14.08□□□□□ -0.16
RAB5AP20339 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
RAB5AP20339 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB5AP20339 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB5AP20339 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
RAB5AP20339 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.08□□□□□ -0.16
RAB5AP20339 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC14.08□□□□□ -0.16
RAB5AP20339 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
RAB5AP20339 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5AP20339 MYC-208ENST00000641036 567 ntBASIC14.08□□□□□ -0.16
RAB5AP20339 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5AP20339 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 AL513523.2-202ENST00000427283 2040 ntBASIC14.08□□□□□ -0.16
RAB5AP20339 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB5AP20339 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
RAB5AP20339 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.08□□□□□ -0.16
RAB5AP20339 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB5AP20339 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB5AP20339 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB5AP20339 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB5AP20339 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB5AP20339 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB5AP20339 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB5AP20339 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB5AP20339 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
RAB5AP20339 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB5AP20339 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB5AP20339 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
RAB5AP20339 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB5AP20339 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 AC079140.4-201ENST00000507448 529 ntBASIC14.07□□□□□ -0.16
RAB5AP20339 AC138907.5-202ENST00000569484 235 ntBASIC14.07□□□□□ -0.16
RAB5AP20339 AC008764.7-201ENST00000593779 1081 ntBASIC14.07□□□□□ -0.16
RAB5AP20339 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB5AP20339 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB5AP20339 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB5AP20339 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB5AP20339 AC008556.1-201ENST00000610908 2040 ntBASIC14.07□□□□□ -0.16
RAB5AP20339 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB5AP20339 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB5AP20339 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB5AP20339 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB5AP20339 HLA-G-202ENST00000376815 851 ntBASIC14.06□□□□□ -0.16
RAB5AP20339 HLA-G-203ENST00000376818 1127 ntBASIC14.06□□□□□ -0.16
RAB5AP20339 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB5AP20339 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RAB5AP20339 GUSBP5-201ENST00000418136 578 ntBASIC14.06□□□□□ -0.16
RAB5AP20339 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.06□□□□□ -0.16
RAB5AP20339 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB5AP20339 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB5AP20339 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5AP20339 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms