Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.71■■□□□ 1.07
SEMA3EO15041 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SEMA3EO15041 KRT18P67-201ENST00000432816 1264 ntBASIC21.71■■□□□ 1.07
SEMA3EO15041 AC007967.3-201ENST00000434308 558 ntBASIC21.71■■□□□ 1.07
SEMA3EO15041 FAM197Y8-203ENST00000450145 560 ntBASIC21.71■■□□□ 1.07
SEMA3EO15041 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
SEMA3EO15041 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.71■■□□□ 1.07
SEMA3EO15041 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SEMA3EO15041 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.71■■□□□ 1.07
SEMA3EO15041 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SEMA3EO15041 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.71■■□□□ 1.07
SEMA3EO15041 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SEMA3EO15041 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC21.71■■□□□ 1.07
SEMA3EO15041 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SEMA3EO15041 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SEMA3EO15041 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SEMA3EO15041 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SEMA3EO15041 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SEMA3EO15041 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
SEMA3EO15041 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SEMA3EO15041 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SEMA3EO15041 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SEMA3EO15041 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.07
SEMA3EO15041 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEMA3EO15041 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SEMA3EO15041 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SEMA3EO15041 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SEMA3EO15041 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEMA3EO15041 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEMA3EO15041 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SEMA3EO15041 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEMA3EO15041 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.7■■□□□ 1.06
SEMA3EO15041 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEMA3EO15041 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.7■■□□□ 1.06
SEMA3EO15041 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.7■■□□□ 1.06
SEMA3EO15041 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SEMA3EO15041 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.7■■□□□ 1.06
SEMA3EO15041 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC21.7■■□□□ 1.06
SEMA3EO15041 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC21.7■■□□□ 1.06
SEMA3EO15041 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SEMA3EO15041 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SEMA3EO15041 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC21.7■■□□□ 1.06
SEMA3EO15041 AC093677.2-201ENST00000600169 1863 ntBASIC21.7■■□□□ 1.06
SEMA3EO15041 SP100-208ENST00000427101 1922 ntTSL 2 BASIC21.7■■□□□ 1.06
SEMA3EO15041 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.7■■□□□ 1.06
SEMA3EO15041 KRT8P47-201ENST00000604727 1398 ntBASIC21.7■■□□□ 1.06
SEMA3EO15041 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEMA3EO15041 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SEMA3EO15041 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SEMA3EO15041 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.7■■□□□ 1.06
SEMA3EO15041 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.69■■□□□ 1.06
SEMA3EO15041 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
SEMA3EO15041 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEMA3EO15041 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEMA3EO15041 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.69■■□□□ 1.06
SEMA3EO15041 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
SEMA3EO15041 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEMA3EO15041 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEMA3EO15041 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SEMA3EO15041 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEMA3EO15041 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC21.69■■□□□ 1.06
SEMA3EO15041 SCARNA2-201ENST00000458748 420 ntBASIC21.69■■□□□ 1.06
SEMA3EO15041 AF186996.4-201ENST00000467186 377 ntBASIC21.69■■□□□ 1.06
SEMA3EO15041 RNA5SP419-201ENST00000515908 135 ntBASIC21.69■■□□□ 1.06
SEMA3EO15041 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SEMA3EO15041 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.69■■□□□ 1.06
SEMA3EO15041 MTDHP3-201ENST00000594186 672 ntBASIC21.69■■□□□ 1.06
SEMA3EO15041 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.69■■□□□ 1.06
SEMA3EO15041 AL773604.1-201ENST00000617417 272 ntBASIC21.69■■□□□ 1.06
SEMA3EO15041 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC21.69■■□□□ 1.06
SEMA3EO15041 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEMA3EO15041 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEMA3EO15041 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SEMA3EO15041 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SEMA3EO15041 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SEMA3EO15041 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC21.68■■□□□ 1.06
SEMA3EO15041 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.68■■□□□ 1.06
SEMA3EO15041 AC093503.3-201ENST00000624917 2352 ntBASIC21.68■■□□□ 1.06
SEMA3EO15041 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SEMA3EO15041 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.68■■□□□ 1.06
SEMA3EO15041 AC004408.2-201ENST00000623613 2777 ntBASIC21.68■■□□□ 1.06
SEMA3EO15041 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.68■■□□□ 1.06
SEMA3EO15041 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC21.68■■□□□ 1.06
SEMA3EO15041 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC21.68■■□□□ 1.06
SEMA3EO15041 AC122714.2-201ENST00000502787 707 ntBASIC21.68■■□□□ 1.06
SEMA3EO15041 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.68■■□□□ 1.06
SEMA3EO15041 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.68■■□□□ 1.06
SEMA3EO15041 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SEMA3EO15041 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.68■■□□□ 1.06
SEMA3EO15041 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SEMA3EO15041 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms