Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AC022898.2-201ENST00000616822 1312 ntBASIC23.2■■□□□ 1.3
CHL1O00533 AKR1C7P-201ENST00000305623 895 ntBASIC23.2■■□□□ 1.3
CHL1O00533 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHL1O00533 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHL1O00533 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHL1O00533 EMD-201ENST00000369835 966 ntTSL 3 BASIC23.2■■□□□ 1.3
CHL1O00533 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.2■■□□□ 1.3
CHL1O00533 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC23.2■■□□□ 1.3
CHL1O00533 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC23.2■■□□□ 1.3
CHL1O00533 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CHL1O00533 EMBP1-201ENST00000458200 901 ntBASIC23.2■■□□□ 1.3
CHL1O00533 AC096582.2-201ENST00000510860 516 ntBASIC23.2■■□□□ 1.3
CHL1O00533 TPM1-218ENST00000559281 851 ntTSL 5 BASIC23.2■■□□□ 1.3
CHL1O00533 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHL1O00533 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHL1O00533 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC23.2■■□□□ 1.3
CHL1O00533 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHL1O00533 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHL1O00533 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CHL1O00533 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CHL1O00533 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CHL1O00533 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
CHL1O00533 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.19■■□□□ 1.3
CHL1O00533 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 DFFB-203ENST00000341385 572 ntTSL 5 BASIC23.19■■□□□ 1.3
CHL1O00533 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
CHL1O00533 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.19■■□□□ 1.3
CHL1O00533 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC23.19■■□□□ 1.3
CHL1O00533 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
CHL1O00533 AC100803.2-201ENST00000562459 1963 ntBASIC23.19■■□□□ 1.3
CHL1O00533 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC23.19■■□□□ 1.3
CHL1O00533 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CHL1O00533 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC23.18■■□□□ 1.3
CHL1O00533 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.18■■□□□ 1.3
CHL1O00533 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC23.18■■□□□ 1.3
CHL1O00533 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC23.18■■□□□ 1.3
CHL1O00533 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC23.18■■□□□ 1.3
CHL1O00533 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC23.18■■□□□ 1.3
CHL1O00533 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC23.18■■□□□ 1.3
CHL1O00533 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 PP7080-204ENST00000510714 601 ntTSL 3 BASIC23.18■■□□□ 1.3
CHL1O00533 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC23.18■■□□□ 1.3
CHL1O00533 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC23.18■■□□□ 1.3
CHL1O00533 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CHL1O00533 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC23.17■■□□□ 1.3
CHL1O00533 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHL1O00533 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHL1O00533 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHL1O00533 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC23.17■■□□□ 1.3
CHL1O00533 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC23.17■■□□□ 1.3
CHL1O00533 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHL1O00533 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHL1O00533 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHL1O00533 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC23.17■■□□□ 1.3
CHL1O00533 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHL1O00533 AC007967.3-201ENST00000434308 558 ntBASIC23.17■■□□□ 1.3
CHL1O00533 TPM4P1-201ENST00000436100 807 ntBASIC23.17■■□□□ 1.3
CHL1O00533 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC23.17■■□□□ 1.3
CHL1O00533 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC23.17■■□□□ 1.3
CHL1O00533 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CHL1O00533 AL591684.3-201ENST00000605187 298 ntBASIC23.17■■□□□ 1.3
CHL1O00533 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.17■■□□□ 1.3
CHL1O00533 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHL1O00533 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC23.17■■□□□ 1.3
CHL1O00533 AC010460.3-201ENST00000511359 1579 ntBASIC23.17■■□□□ 1.3
CHL1O00533 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHL1O00533 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC23.17■■□□□ 1.3
CHL1O00533 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CHL1O00533 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHL1O00533 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CHL1O00533 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CHL1O00533 ABALON-201ENST00000629058 1903 ntBASIC23.16■■□□□ 1.3
CHL1O00533 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23.16■■□□□ 1.3
CHL1O00533 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC23.16■■□□□ 1.3
CHL1O00533 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms