Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CFAP99D6REC4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.07■□□□□ 0.48
CFAP99D6REC4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.06■□□□□ 0.48
CFAP99D6REC4 AL390961.4-201ENST00000623958 2535 ntBASIC18.06■□□□□ 0.48
CFAP99D6REC4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CFAP99D6REC4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.06■□□□□ 0.48
CFAP99D6REC4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
CFAP99D6REC4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.06■□□□□ 0.48
CFAP99D6REC4 HLA-F-220ENST00000434407 884 ntBASIC18.06■□□□□ 0.48
CFAP99D6REC4 AC024563.2-201ENST00000603282 481 ntBASIC18.06■□□□□ 0.48
CFAP99D6REC4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
CFAP99D6REC4 AC079602.3-201ENST00000623931 403 ntBASIC18.06■□□□□ 0.48
CFAP99D6REC4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.06■□□□□ 0.48
CFAP99D6REC4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.06■□□□□ 0.48
CFAP99D6REC4 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.06■□□□□ 0.48
CFAP99D6REC4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CFAP99D6REC4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CFAP99D6REC4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CFAP99D6REC4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.06■□□□□ 0.48
CFAP99D6REC4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 AL024508.2-201ENST00000607749 1894 ntBASIC18.05■□□□□ 0.48
CFAP99D6REC4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 HBZP1-201ENST00000354915 429 ntBASIC18.05■□□□□ 0.48
CFAP99D6REC4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 AC092597.1-201ENST00000487352 616 ntBASIC18.05■□□□□ 0.48
CFAP99D6REC4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CFAP99D6REC4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.05■□□□□ 0.48
CFAP99D6REC4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CFAP99D6REC4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CFAP99D6REC4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CFAP99D6REC4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 KRT89P-201ENST00000620027 1478 ntBASIC18.04■□□□□ 0.48
CFAP99D6REC4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CFAP99D6REC4 KRT18P48-201ENST00000434763 852 ntBASIC18.04■□□□□ 0.48
CFAP99D6REC4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 ZNF444P1-201ENST00000559497 298 ntBASIC18.04■□□□□ 0.48
CFAP99D6REC4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CFAP99D6REC4 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CFAP99D6REC4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.04■□□□□ 0.48
CFAP99D6REC4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CFAP99D6REC4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CFAP99D6REC4 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms