Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.9■■■□□ 2.38
PCDHAC2Q9Y5I4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC29.9■■■□□ 2.38
PCDHAC2Q9Y5I4 AL035685.1-201ENST00000636663 812 ntBASIC29.9■■■□□ 2.38
PCDHAC2Q9Y5I4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
PCDHAC2Q9Y5I4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC29.89■■■□□ 2.38
PCDHAC2Q9Y5I4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
PCDHAC2Q9Y5I4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
PCDHAC2Q9Y5I4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC29.87■■■□□ 2.37
PCDHAC2Q9Y5I4 KRT8P33-201ENST00000508125 1423 ntBASIC29.87■■■□□ 2.37
PCDHAC2Q9Y5I4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
PCDHAC2Q9Y5I4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC29.86■■■□□ 2.37
PCDHAC2Q9Y5I4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC29.86■■■□□ 2.37
PCDHAC2Q9Y5I4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
PCDHAC2Q9Y5I4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
PCDHAC2Q9Y5I4 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
PCDHAC2Q9Y5I4 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
PCDHAC2Q9Y5I4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.85■■■□□ 2.37
PCDHAC2Q9Y5I4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
PCDHAC2Q9Y5I4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.85■■■□□ 2.37
PCDHAC2Q9Y5I4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC29.85■■■□□ 2.37
PCDHAC2Q9Y5I4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.85■■■□□ 2.37
PCDHAC2Q9Y5I4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC29.85■■■□□ 2.37
PCDHAC2Q9Y5I4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
PCDHAC2Q9Y5I4 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.84■■■□□ 2.37
PCDHAC2Q9Y5I4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PCDHAC2Q9Y5I4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
PCDHAC2Q9Y5I4 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
PCDHAC2Q9Y5I4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
PCDHAC2Q9Y5I4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC29.83■■■□□ 2.37
PCDHAC2Q9Y5I4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC29.83■■■□□ 2.37
PCDHAC2Q9Y5I4 PVT1_1.1-201ENST00000615125 194 ntBASIC29.83■■■□□ 2.37
PCDHAC2Q9Y5I4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
PCDHAC2Q9Y5I4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
PCDHAC2Q9Y5I4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC29.82■■■□□ 2.37
PCDHAC2Q9Y5I4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PCDHAC2Q9Y5I4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PCDHAC2Q9Y5I4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.82■■■□□ 2.36
PCDHAC2Q9Y5I4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
PCDHAC2Q9Y5I4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC29.82■■■□□ 2.36
PCDHAC2Q9Y5I4 BHLHE23-202ENST00000612929 1109 ntBASIC29.82■■■□□ 2.36
PCDHAC2Q9Y5I4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PCDHAC2Q9Y5I4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC29.8■■■□□ 2.36
PCDHAC2Q9Y5I4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC29.8■■■□□ 2.36
PCDHAC2Q9Y5I4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
PCDHAC2Q9Y5I4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.8■■■□□ 2.36
PCDHAC2Q9Y5I4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
PCDHAC2Q9Y5I4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
PCDHAC2Q9Y5I4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
PCDHAC2Q9Y5I4 AC103834.1-201ENST00000520383 144 ntBASIC29.79■■■□□ 2.36
PCDHAC2Q9Y5I4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.79■■■□□ 2.36
PCDHAC2Q9Y5I4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.79■■■□□ 2.36
PCDHAC2Q9Y5I4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PCDHAC2Q9Y5I4 MIR3960-201ENST00000583311 91 ntBASIC29.78■■■□□ 2.36
PCDHAC2Q9Y5I4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC29.78■■■□□ 2.36
PCDHAC2Q9Y5I4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
PCDHAC2Q9Y5I4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PCDHAC2Q9Y5I4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC29.77■■■□□ 2.36
PCDHAC2Q9Y5I4 AL359504.2-201ENST00000605506 1601 ntBASIC29.77■■■□□ 2.36
PCDHAC2Q9Y5I4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
PCDHAC2Q9Y5I4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
PCDHAC2Q9Y5I4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
PCDHAC2Q9Y5I4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
PCDHAC2Q9Y5I4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
PCDHAC2Q9Y5I4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
PCDHAC2Q9Y5I4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC29.76■■■□□ 2.35
PCDHAC2Q9Y5I4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PCDHAC2Q9Y5I4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
PCDHAC2Q9Y5I4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC29.75■■■□□ 2.35
PCDHAC2Q9Y5I4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC29.75■■■□□ 2.35
PCDHAC2Q9Y5I4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
PCDHAC2Q9Y5I4 ST7-205ENST00000393446 2114 ntTSL 5 BASIC29.74■■■□□ 2.35
PCDHAC2Q9Y5I4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC29.74■■■□□ 2.35
PCDHAC2Q9Y5I4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
PCDHAC2Q9Y5I4 MIR6765-201ENST00000614092 87 ntBASIC29.74■■■□□ 2.35
PCDHAC2Q9Y5I4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC29.73■■■□□ 2.35
PCDHAC2Q9Y5I4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDHAC2Q9Y5I4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
PCDHAC2Q9Y5I4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
PCDHAC2Q9Y5I4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDHAC2Q9Y5I4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC29.73■■■□□ 2.35
PCDHAC2Q9Y5I4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDHAC2Q9Y5I4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
PCDHAC2Q9Y5I4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PCDHAC2Q9Y5I4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
PCDHAC2Q9Y5I4 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC29.71■■■□□ 2.35
PCDHAC2Q9Y5I4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCDHAC2Q9Y5I4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC29.71■■■□□ 2.35
PCDHAC2Q9Y5I4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC29.71■■■□□ 2.35
PCDHAC2Q9Y5I4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
PCDHAC2Q9Y5I4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.71■■■□□ 2.35
PCDHAC2Q9Y5I4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
PCDHAC2Q9Y5I4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
PCDHAC2Q9Y5I4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCDHAC2Q9Y5I4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCDHAC2Q9Y5I4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCDHAC2Q9Y5I4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC29.69■■■□□ 2.34
PCDHAC2Q9Y5I4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.69■■■□□ 2.34
PCDHAC2Q9Y5I4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
PCDHAC2Q9Y5I4 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.69■■■□□ 2.34
PCDHAC2Q9Y5I4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC29.69■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms