Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RCL1Q9Y2P8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.09■□□□□ 0.81
RCL1Q9Y2P8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RCL1Q9Y2P8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RCL1Q9Y2P8 ERN1-208ENST00000606895 2068 ntBASIC20.08■□□□□ 0.81
RCL1Q9Y2P8 SETD8P1-201ENST00000623146 1180 ntBASIC20.08■□□□□ 0.81
RCL1Q9Y2P8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RCL1Q9Y2P8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RCL1Q9Y2P8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RCL1Q9Y2P8 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
RCL1Q9Y2P8 WHAMMP2-203ENST00000563942 1603 ntBASIC20.07■□□□□ 0.8
RCL1Q9Y2P8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.07■□□□□ 0.8
RCL1Q9Y2P8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.06■□□□□ 0.8
RCL1Q9Y2P8 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCL1Q9Y2P8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCL1Q9Y2P8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCL1Q9Y2P8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCL1Q9Y2P8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCL1Q9Y2P8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RCL1Q9Y2P8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
RCL1Q9Y2P8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCL1Q9Y2P8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RCL1Q9Y2P8 AL391121.1-201ENST00000607967 1349 ntBASIC20.05■□□□□ 0.8
RCL1Q9Y2P8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RCL1Q9Y2P8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RCL1Q9Y2P8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.04■□□□□ 0.8
RCL1Q9Y2P8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.04■□□□□ 0.8
RCL1Q9Y2P8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.04■□□□□ 0.8
RCL1Q9Y2P8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RCL1Q9Y2P8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCL1Q9Y2P8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RCL1Q9Y2P8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RCL1Q9Y2P8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RCL1Q9Y2P8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCL1Q9Y2P8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.02■□□□□ 0.8
RCL1Q9Y2P8 RARRES2P7-201ENST00000567349 469 ntBASIC20.02■□□□□ 0.8
RCL1Q9Y2P8 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCL1Q9Y2P8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RCL1Q9Y2P8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RCL1Q9Y2P8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RCL1Q9Y2P8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
RCL1Q9Y2P8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RCL1Q9Y2P8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RCL1Q9Y2P8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RCL1Q9Y2P8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20■□□□□ 0.79
RCL1Q9Y2P8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20■□□□□ 0.79
RCL1Q9Y2P8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20■□□□□ 0.79
RCL1Q9Y2P8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RCL1Q9Y2P8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCL1Q9Y2P8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCL1Q9Y2P8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCL1Q9Y2P8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RCL1Q9Y2P8 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RCL1Q9Y2P8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
RCL1Q9Y2P8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.99■□□□□ 0.79
RCL1Q9Y2P8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RCL1Q9Y2P8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.98■□□□□ 0.79
RCL1Q9Y2P8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RCL1Q9Y2P8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RCL1Q9Y2P8 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.98■□□□□ 0.79
RCL1Q9Y2P8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RCL1Q9Y2P8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.98■□□□□ 0.79
RCL1Q9Y2P8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RCL1Q9Y2P8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RCL1Q9Y2P8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RCL1Q9Y2P8 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RCL1Q9Y2P8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
RCL1Q9Y2P8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.97■□□□□ 0.79
RCL1Q9Y2P8 AC142472.1-201ENST00000612013 1741 ntBASIC19.97■□□□□ 0.79
RCL1Q9Y2P8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RCL1Q9Y2P8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.97■□□□□ 0.79
RCL1Q9Y2P8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.97■□□□□ 0.79
RCL1Q9Y2P8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RCL1Q9Y2P8 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCL1Q9Y2P8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCL1Q9Y2P8 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCL1Q9Y2P8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RCL1Q9Y2P8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RCL1Q9Y2P8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RCL1Q9Y2P8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RCL1Q9Y2P8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RCL1Q9Y2P8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RCL1Q9Y2P8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.95■□□□□ 0.78
RCL1Q9Y2P8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RCL1Q9Y2P8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RCL1Q9Y2P8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RCL1Q9Y2P8 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RCL1Q9Y2P8 CAHM-201ENST00000604200 896 ntBASIC19.94■□□□□ 0.78
RCL1Q9Y2P8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RCL1Q9Y2P8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RCL1Q9Y2P8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCL1Q9Y2P8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RCL1Q9Y2P8 AC142381.3-201ENST00000568208 1670 ntBASIC19.94■□□□□ 0.78
RCL1Q9Y2P8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.93■□□□□ 0.78
RCL1Q9Y2P8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RCL1Q9Y2P8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RCL1Q9Y2P8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCL1Q9Y2P8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RCL1Q9Y2P8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RCL1Q9Y2P8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms