Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
FOXA2Q9Y261 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
FOXA2Q9Y261 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXA2Q9Y261 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
FOXA2Q9Y261 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
FOXA2Q9Y261 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.95■□□□□ 0.78
FOXA2Q9Y261 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
FOXA2Q9Y261 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.95■□□□□ 0.78
FOXA2Q9Y261 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
FOXA2Q9Y261 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
FOXA2Q9Y261 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXA2Q9Y261 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXA2Q9Y261 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXA2Q9Y261 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXA2Q9Y261 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXA2Q9Y261 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXA2Q9Y261 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXA2Q9Y261 MIR3648-2-201ENST00000581792 180 ntBASIC19.93■□□□□ 0.78
FOXA2Q9Y261 MIR3648-1-201ENST00000615959 180 ntBASIC19.93■□□□□ 0.78
FOXA2Q9Y261 CR559946.2-201ENST00000623684 991 ntBASIC19.93■□□□□ 0.78
FOXA2Q9Y261 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.93■□□□□ 0.78
FOXA2Q9Y261 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FOXA2Q9Y261 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXA2Q9Y261 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FOXA2Q9Y261 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXA2Q9Y261 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXA2Q9Y261 AP004609.3-201ENST00000610705 1884 ntBASIC19.92■□□□□ 0.78
FOXA2Q9Y261 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXA2Q9Y261 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXA2Q9Y261 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXA2Q9Y261 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
FOXA2Q9Y261 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXA2Q9Y261 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
FOXA2Q9Y261 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.92■□□□□ 0.78
FOXA2Q9Y261 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXA2Q9Y261 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXA2Q9Y261 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXA2Q9Y261 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
FOXA2Q9Y261 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
FOXA2Q9Y261 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
FOXA2Q9Y261 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
FOXA2Q9Y261 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.89■□□□□ 0.77
FOXA2Q9Y261 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
FOXA2Q9Y261 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.88■□□□□ 0.77
FOXA2Q9Y261 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.88■□□□□ 0.77
FOXA2Q9Y261 AC016575.1-201ENST00000607026 382 ntBASIC19.88■□□□□ 0.77
FOXA2Q9Y261 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FOXA2Q9Y261 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
FOXA2Q9Y261 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FOXA2Q9Y261 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
FOXA2Q9Y261 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXA2Q9Y261 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXA2Q9Y261 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC19.86■□□□□ 0.77
FOXA2Q9Y261 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FOXA2Q9Y261 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FOXA2Q9Y261 AC092803.2-201ENST00000564287 1899 ntBASIC19.86■□□□□ 0.77
FOXA2Q9Y261 DUSP8P4-201ENST00000399538 1761 ntBASIC19.85■□□□□ 0.77
FOXA2Q9Y261 AC142472.1-201ENST00000612013 1741 ntBASIC19.85■□□□□ 0.77
FOXA2Q9Y261 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
FOXA2Q9Y261 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FOXA2Q9Y261 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
FOXA2Q9Y261 WHAMMP3-201ENST00000611636 1609 ntBASIC19.84■□□□□ 0.77
FOXA2Q9Y261 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXA2Q9Y261 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXA2Q9Y261 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXA2Q9Y261 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXA2Q9Y261 AC008813.1-201ENST00000536597 885 ntBASIC19.84■□□□□ 0.77
FOXA2Q9Y261 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FOXA2Q9Y261 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FOXA2Q9Y261 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FOXA2Q9Y261 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.83■□□□□ 0.77
FOXA2Q9Y261 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
FOXA2Q9Y261 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.83■□□□□ 0.76
FOXA2Q9Y261 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXA2Q9Y261 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXA2Q9Y261 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXA2Q9Y261 RPS2-210ENST00000530225 765 ntTSL 2 BASIC19.82■□□□□ 0.76
FOXA2Q9Y261 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FOXA2Q9Y261 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXA2Q9Y261 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FOXA2Q9Y261 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.81■□□□□ 0.76
FOXA2Q9Y261 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FOXA2Q9Y261 HLA-V-202ENST00000446817 847 ntBASIC19.81■□□□□ 0.76
FOXA2Q9Y261 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FOXA2Q9Y261 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXA2Q9Y261 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
FOXA2Q9Y261 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXA2Q9Y261 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXA2Q9Y261 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXA2Q9Y261 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FOXA2Q9Y261 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
FOXA2Q9Y261 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.8■□□□□ 0.76
FOXA2Q9Y261 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
FOXA2Q9Y261 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
FOXA2Q9Y261 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXA2Q9Y261 MIR639-201ENST00000384974 98 ntBASIC19.79■□□□□ 0.76
FOXA2Q9Y261 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXA2Q9Y261 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FOXA2Q9Y261 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FOXA2Q9Y261 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms