Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AC026202.3-201ENST00000600805 1127 ntBASIC24.1■■□□□ 1.45
LRIT1Q9P2V4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRIT1Q9P2V4 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
LRIT1Q9P2V4 RP9P-202ENST00000450133 1212 ntBASIC24.09■■□□□ 1.45
LRIT1Q9P2V4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
LRIT1Q9P2V4 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
LRIT1Q9P2V4 AC129492.7-201ENST00000622992 756 ntBASIC24.09■■□□□ 1.45
LRIT1Q9P2V4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.08■■□□□ 1.45
LRIT1Q9P2V4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
LRIT1Q9P2V4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
LRIT1Q9P2V4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
LRIT1Q9P2V4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
LRIT1Q9P2V4 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
LRIT1Q9P2V4 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRIT1Q9P2V4 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
LRIT1Q9P2V4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRIT1Q9P2V4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
LRIT1Q9P2V4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRIT1Q9P2V4 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.06■■□□□ 1.44
LRIT1Q9P2V4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.06■■□□□ 1.44
LRIT1Q9P2V4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
LRIT1Q9P2V4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
LRIT1Q9P2V4 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRIT1Q9P2V4 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
LRIT1Q9P2V4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRIT1Q9P2V4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
LRIT1Q9P2V4 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRIT1Q9P2V4 AC093536.1-201ENST00000569153 554 ntBASIC24.05■■□□□ 1.44
LRIT1Q9P2V4 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRIT1Q9P2V4 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRIT1Q9P2V4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRIT1Q9P2V4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRIT1Q9P2V4 DUX4L18-201ENST00000553347 1267 ntBASIC24.04■■□□□ 1.44
LRIT1Q9P2V4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRIT1Q9P2V4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
LRIT1Q9P2V4 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.03■■□□□ 1.44
LRIT1Q9P2V4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRIT1Q9P2V4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.03■■□□□ 1.44
LRIT1Q9P2V4 MIR3960-201ENST00000583311 91 ntBASIC24.03■■□□□ 1.44
LRIT1Q9P2V4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.03■■□□□ 1.44
LRIT1Q9P2V4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
LRIT1Q9P2V4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRIT1Q9P2V4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
LRIT1Q9P2V4 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRIT1Q9P2V4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRIT1Q9P2V4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.02■■□□□ 1.44
LRIT1Q9P2V4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.01■■□□□ 1.43
LRIT1Q9P2V4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
LRIT1Q9P2V4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.01■■□□□ 1.43
LRIT1Q9P2V4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
LRIT1Q9P2V4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.01■■□□□ 1.43
LRIT1Q9P2V4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.01■■□□□ 1.43
LRIT1Q9P2V4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRIT1Q9P2V4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
LRIT1Q9P2V4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24■■□□□ 1.43
LRIT1Q9P2V4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24■■□□□ 1.43
LRIT1Q9P2V4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
LRIT1Q9P2V4 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
LRIT1Q9P2V4 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
LRIT1Q9P2V4 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
LRIT1Q9P2V4 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.99■■□□□ 1.43
LRIT1Q9P2V4 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRIT1Q9P2V4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRIT1Q9P2V4 RAP2CP1-202ENST00000605179 643 ntBASIC23.98■■□□□ 1.43
LRIT1Q9P2V4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.98■■□□□ 1.43
LRIT1Q9P2V4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.98■■□□□ 1.43
LRIT1Q9P2V4 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
LRIT1Q9P2V4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRIT1Q9P2V4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRIT1Q9P2V4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
LRIT1Q9P2V4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
LRIT1Q9P2V4 AL359504.2-201ENST00000605506 1601 ntBASIC23.96■■□□□ 1.43
LRIT1Q9P2V4 WHAMMP3-201ENST00000611636 1609 ntBASIC23.96■■□□□ 1.43
LRIT1Q9P2V4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LRIT1Q9P2V4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.96■■□□□ 1.43
LRIT1Q9P2V4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
LRIT1Q9P2V4 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LRIT1Q9P2V4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LRIT1Q9P2V4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
LRIT1Q9P2V4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
LRIT1Q9P2V4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.95■■□□□ 1.42
LRIT1Q9P2V4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
LRIT1Q9P2V4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
LRIT1Q9P2V4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.95■■□□□ 1.42
LRIT1Q9P2V4 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRIT1Q9P2V4 DUX4L9-201ENST00000449051 1259 ntBASIC23.94■■□□□ 1.42
LRIT1Q9P2V4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.94■■□□□ 1.42
LRIT1Q9P2V4 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRIT1Q9P2V4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.93■■□□□ 1.42
LRIT1Q9P2V4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
LRIT1Q9P2V4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.93■■□□□ 1.42
LRIT1Q9P2V4 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.93■■□□□ 1.42
LRIT1Q9P2V4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
LRIT1Q9P2V4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRIT1Q9P2V4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRIT1Q9P2V4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.93■■□□□ 1.42
LRIT1Q9P2V4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
LRIT1Q9P2V4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.92■■□□□ 1.42
LRIT1Q9P2V4 RARRES2P1-201ENST00000474487 481 ntBASIC23.92■■□□□ 1.42
LRIT1Q9P2V4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms