Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.63■□□□□ 0.89
Q9N2K0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Q9N2K0 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9N2K0 DUX4L29-201ENST00000425409 679 ntBASIC20.62■□□□□ 0.89
Q9N2K0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.62■□□□□ 0.89
Q9N2K0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Q9N2K0 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Q9N2K0 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Q9N2K0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9N2K0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Q9N2K0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.61■□□□□ 0.89
Q9N2K0 AC020928.2-201ENST00000588717 2197 ntBASIC20.61■□□□□ 0.89
Q9N2K0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Q9N2K0 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.6■□□□□ 0.89
Q9N2K0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.6■□□□□ 0.89
Q9N2K0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.6■□□□□ 0.89
Q9N2K0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.6■□□□□ 0.89
Q9N2K0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.6■□□□□ 0.89
Q9N2K0 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Q9N2K0 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Q9N2K0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.59■□□□□ 0.89
Q9N2K0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Q9N2K0 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q9N2K0 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q9N2K0 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Q9N2K0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q9N2K0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q9N2K0 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Q9N2K0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q9N2K0 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Q9N2K0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Q9N2K0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Q9N2K0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Q9N2K0 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Q9N2K0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q9N2K0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.57■□□□□ 0.88
Q9N2K0 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Q9N2K0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Q9N2K0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Q9N2K0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.57■□□□□ 0.88
Q9N2K0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q9N2K0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q9N2K0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Q9N2K0 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.57■□□□□ 0.88
Q9N2K0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q9N2K0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Q9N2K0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q9N2K0 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.56■□□□□ 0.88
Q9N2K0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q9N2K0 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Q9N2K0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Q9N2K0 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Q9N2K0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Q9N2K0 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q9N2K0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q9N2K0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.55■□□□□ 0.88
Q9N2K0 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Q9N2K0 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Q9N2K0 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Q9N2K0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q9N2K0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Q9N2K0 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Q9N2K0 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Q9N2K0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.54■□□□□ 0.88
Q9N2K0 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.54■□□□□ 0.88
Q9N2K0 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.54■□□□□ 0.88
Q9N2K0 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Q9N2K0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q9N2K0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Q9N2K0 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Q9N2K0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
Q9N2K0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Q9N2K0 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Q9N2K0 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q9N2K0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Q9N2K0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Q9N2K0 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Q9N2K0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.52■□□□□ 0.88
Q9N2K0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Q9N2K0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.52■□□□□ 0.88
Q9N2K0 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Q9N2K0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.51■□□□□ 0.87
Q9N2K0 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Q9N2K0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.51■□□□□ 0.87
Q9N2K0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q9N2K0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.5■□□□□ 0.87
Q9N2K0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.5■□□□□ 0.87
Q9N2K0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q9N2K0 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q9N2K0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.5■□□□□ 0.87
Q9N2K0 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Q9N2K0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Q9N2K0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q9N2K0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q9N2K0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Q9N2K0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.49■□□□□ 0.87
Q9N2K0 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.49■□□□□ 0.87
Q9N2K0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q9N2K0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Q9N2K0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms