Protein–RNA interactions for Protein: Q9HCJ2

LRRC4C, Leucine-rich repeat-containing protein 4C, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4CQ9HCJ2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
LRRC4CQ9HCJ2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRC4CQ9HCJ2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
LRRC4CQ9HCJ2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
LRRC4CQ9HCJ2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.31■■□□□ 1.64
LRRC4CQ9HCJ2 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.31■■□□□ 1.64
LRRC4CQ9HCJ2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
LRRC4CQ9HCJ2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
LRRC4CQ9HCJ2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.3■■□□□ 1.64
LRRC4CQ9HCJ2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LRRC4CQ9HCJ2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
LRRC4CQ9HCJ2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRC4CQ9HCJ2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
LRRC4CQ9HCJ2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.29■■□□□ 1.64
LRRC4CQ9HCJ2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
LRRC4CQ9HCJ2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.28■■□□□ 1.64
LRRC4CQ9HCJ2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
LRRC4CQ9HCJ2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.28■■□□□ 1.64
LRRC4CQ9HCJ2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LRRC4CQ9HCJ2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
LRRC4CQ9HCJ2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.26■■□□□ 1.63
LRRC4CQ9HCJ2 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LRRC4CQ9HCJ2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
LRRC4CQ9HCJ2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.25■■□□□ 1.63
LRRC4CQ9HCJ2 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC25.25■■□□□ 1.63
LRRC4CQ9HCJ2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LRRC4CQ9HCJ2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.24■■□□□ 1.63
LRRC4CQ9HCJ2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
LRRC4CQ9HCJ2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.24■■□□□ 1.63
LRRC4CQ9HCJ2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
LRRC4CQ9HCJ2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.24■■□□□ 1.63
LRRC4CQ9HCJ2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
LRRC4CQ9HCJ2 AP004609.3-201ENST00000610705 1884 ntBASIC25.23■■□□□ 1.63
LRRC4CQ9HCJ2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
LRRC4CQ9HCJ2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.23■■□□□ 1.63
LRRC4CQ9HCJ2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRRC4CQ9HCJ2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.23■■□□□ 1.63
LRRC4CQ9HCJ2 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRRC4CQ9HCJ2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
LRRC4CQ9HCJ2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC4CQ9HCJ2 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
LRRC4CQ9HCJ2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
LRRC4CQ9HCJ2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
LRRC4CQ9HCJ2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LRRC4CQ9HCJ2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
LRRC4CQ9HCJ2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
LRRC4CQ9HCJ2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.2■■□□□ 1.62
LRRC4CQ9HCJ2 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
LRRC4CQ9HCJ2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
LRRC4CQ9HCJ2 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
LRRC4CQ9HCJ2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LRRC4CQ9HCJ2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LRRC4CQ9HCJ2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LRRC4CQ9HCJ2 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LRRC4CQ9HCJ2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.18■■□□□ 1.62
LRRC4CQ9HCJ2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
LRRC4CQ9HCJ2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
LRRC4CQ9HCJ2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
LRRC4CQ9HCJ2 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRRC4CQ9HCJ2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
LRRC4CQ9HCJ2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.17■■□□□ 1.62
LRRC4CQ9HCJ2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.17■■□□□ 1.62
LRRC4CQ9HCJ2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRRC4CQ9HCJ2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRRC4CQ9HCJ2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.17■■□□□ 1.62
LRRC4CQ9HCJ2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRRC4CQ9HCJ2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
LRRC4CQ9HCJ2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
LRRC4CQ9HCJ2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
LRRC4CQ9HCJ2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
LRRC4CQ9HCJ2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.16■■□□□ 1.62
LRRC4CQ9HCJ2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
LRRC4CQ9HCJ2 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.15■■□□□ 1.62
LRRC4CQ9HCJ2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
LRRC4CQ9HCJ2 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.15■■□□□ 1.62
LRRC4CQ9HCJ2 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
LRRC4CQ9HCJ2 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
LRRC4CQ9HCJ2 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
LRRC4CQ9HCJ2 AC044849.2-201ENST00000606596 710 ntBASIC25.14■■□□□ 1.62
LRRC4CQ9HCJ2 AC087741.3-201ENST00000624270 1347 ntBASIC25.13■■□□□ 1.61
LRRC4CQ9HCJ2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
LRRC4CQ9HCJ2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
LRRC4CQ9HCJ2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.13■■□□□ 1.61
LRRC4CQ9HCJ2 ERN1-208ENST00000606895 2068 ntBASIC25.13■■□□□ 1.61
LRRC4CQ9HCJ2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.12■■□□□ 1.61
LRRC4CQ9HCJ2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
LRRC4CQ9HCJ2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC25.12■■□□□ 1.61
LRRC4CQ9HCJ2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.12■■□□□ 1.61
LRRC4CQ9HCJ2 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC25.12■■□□□ 1.61
LRRC4CQ9HCJ2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
LRRC4CQ9HCJ2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.12■■□□□ 1.61
LRRC4CQ9HCJ2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
LRRC4CQ9HCJ2 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
LRRC4CQ9HCJ2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
LRRC4CQ9HCJ2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
LRRC4CQ9HCJ2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.1■■□□□ 1.61
LRRC4CQ9HCJ2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.1■■□□□ 1.61
LRRC4CQ9HCJ2 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.1■■□□□ 1.61
LRRC4CQ9HCJ2 AC110285.7-201ENST00000624417 1536 ntBASIC25.1■■□□□ 1.61
LRRC4CQ9HCJ2 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms