Protein–RNA interactions for Protein: Q9HB40

SCPEP1, Retinoid-inducible serine carboxypeptidase, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCPEP1Q9HB40 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SCPEP1Q9HB40 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCPEP1Q9HB40 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SCPEP1Q9HB40 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SCPEP1Q9HB40 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCPEP1Q9HB40 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCPEP1Q9HB40 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SCPEP1Q9HB40 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SCPEP1Q9HB40 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.01■□□□□ 0.95
SCPEP1Q9HB40 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCPEP1Q9HB40 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.01■□□□□ 0.95
SCPEP1Q9HB40 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCPEP1Q9HB40 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCPEP1Q9HB40 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.01■□□□□ 0.95
SCPEP1Q9HB40 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCPEP1Q9HB40 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCPEP1Q9HB40 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCPEP1Q9HB40 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SCPEP1Q9HB40 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCPEP1Q9HB40 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCPEP1Q9HB40 AC142472.1-201ENST00000612013 1741 ntBASIC20.99■□□□□ 0.95
SCPEP1Q9HB40 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.99■□□□□ 0.95
SCPEP1Q9HB40 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.99■□□□□ 0.95
SCPEP1Q9HB40 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCPEP1Q9HB40 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCPEP1Q9HB40 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCPEP1Q9HB40 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.98■□□□□ 0.95
SCPEP1Q9HB40 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.98■□□□□ 0.95
SCPEP1Q9HB40 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SCPEP1Q9HB40 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCPEP1Q9HB40 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCPEP1Q9HB40 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCPEP1Q9HB40 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCPEP1Q9HB40 ERN1-208ENST00000606895 2068 ntBASIC20.97■□□□□ 0.95
SCPEP1Q9HB40 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SCPEP1Q9HB40 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCPEP1Q9HB40 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.96■□□□□ 0.95
SCPEP1Q9HB40 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCPEP1Q9HB40 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCPEP1Q9HB40 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCPEP1Q9HB40 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCPEP1Q9HB40 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.95■□□□□ 0.94
SCPEP1Q9HB40 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SCPEP1Q9HB40 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCPEP1Q9HB40 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCPEP1Q9HB40 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 CAHM-201ENST00000604200 896 ntBASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 LINC00273-201ENST00000539813 1452 ntBASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SCPEP1Q9HB40 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SCPEP1Q9HB40 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.93■□□□□ 0.94
SCPEP1Q9HB40 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.93■□□□□ 0.94
SCPEP1Q9HB40 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SCPEP1Q9HB40 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCPEP1Q9HB40 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SCPEP1Q9HB40 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCPEP1Q9HB40 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCPEP1Q9HB40 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCPEP1Q9HB40 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCPEP1Q9HB40 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCPEP1Q9HB40 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC20.92■□□□□ 0.94
SCPEP1Q9HB40 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.92■□□□□ 0.94
SCPEP1Q9HB40 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCPEP1Q9HB40 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SCPEP1Q9HB40 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SCPEP1Q9HB40 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SCPEP1Q9HB40 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCPEP1Q9HB40 AC142381.3-201ENST00000568208 1670 ntBASIC20.9■□□□□ 0.94
SCPEP1Q9HB40 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCPEP1Q9HB40 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SCPEP1Q9HB40 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SCPEP1Q9HB40 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SCPEP1Q9HB40 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCPEP1Q9HB40 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SCPEP1Q9HB40 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCPEP1Q9HB40 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SCPEP1Q9HB40 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCPEP1Q9HB40 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCPEP1Q9HB40 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCPEP1Q9HB40 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.88■□□□□ 0.93
SCPEP1Q9HB40 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCPEP1Q9HB40 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SCPEP1Q9HB40 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCPEP1Q9HB40 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SCPEP1Q9HB40 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.87■□□□□ 0.93
SCPEP1Q9HB40 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SCPEP1Q9HB40 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCPEP1Q9HB40 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
SCPEP1Q9HB40 MIR762-201ENST00000390236 83 ntBASIC20.86■□□□□ 0.93
SCPEP1Q9HB40 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
SCPEP1Q9HB40 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms