Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
POLR2J3Q9H1A7 AP004609.3-201ENST00000610705 1884 ntBASIC22.72■■□□□ 1.23
POLR2J3Q9H1A7 WHAMMP3-201ENST00000611636 1609 ntBASIC22.71■■□□□ 1.23
POLR2J3Q9H1A7 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
POLR2J3Q9H1A7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
POLR2J3Q9H1A7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
POLR2J3Q9H1A7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
POLR2J3Q9H1A7 AC142472.1-201ENST00000612013 1741 ntBASIC22.7■■□□□ 1.22
POLR2J3Q9H1A7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
POLR2J3Q9H1A7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
POLR2J3Q9H1A7 AC020928.2-201ENST00000588717 2197 ntBASIC22.69■■□□□ 1.22
POLR2J3Q9H1A7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
POLR2J3Q9H1A7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.69■■□□□ 1.22
POLR2J3Q9H1A7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.69■■□□□ 1.22
POLR2J3Q9H1A7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.69■■□□□ 1.22
POLR2J3Q9H1A7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
POLR2J3Q9H1A7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
POLR2J3Q9H1A7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
POLR2J3Q9H1A7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
POLR2J3Q9H1A7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
POLR2J3Q9H1A7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
POLR2J3Q9H1A7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.67■■□□□ 1.22
POLR2J3Q9H1A7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.67■■□□□ 1.22
POLR2J3Q9H1A7 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
POLR2J3Q9H1A7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
POLR2J3Q9H1A7 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
POLR2J3Q9H1A7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.67■■□□□ 1.22
POLR2J3Q9H1A7 AC092803.2-201ENST00000564287 1899 ntBASIC22.66■■□□□ 1.22
POLR2J3Q9H1A7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
POLR2J3Q9H1A7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
POLR2J3Q9H1A7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
POLR2J3Q9H1A7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.66■■□□□ 1.22
POLR2J3Q9H1A7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
POLR2J3Q9H1A7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.65■■□□□ 1.22
POLR2J3Q9H1A7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
POLR2J3Q9H1A7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
POLR2J3Q9H1A7 DUSP8P4-201ENST00000399538 1761 ntBASIC22.64■■□□□ 1.22
POLR2J3Q9H1A7 LINC01971-201ENST00000617888 1048 ntBASIC22.64■■□□□ 1.21
POLR2J3Q9H1A7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
POLR2J3Q9H1A7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
POLR2J3Q9H1A7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
POLR2J3Q9H1A7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
POLR2J3Q9H1A7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.63■■□□□ 1.21
POLR2J3Q9H1A7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
POLR2J3Q9H1A7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.62■■□□□ 1.21
POLR2J3Q9H1A7 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
POLR2J3Q9H1A7 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.62■■□□□ 1.21
POLR2J3Q9H1A7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
POLR2J3Q9H1A7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
POLR2J3Q9H1A7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.6■■□□□ 1.21
POLR2J3Q9H1A7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
POLR2J3Q9H1A7 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
POLR2J3Q9H1A7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.6■■□□□ 1.21
POLR2J3Q9H1A7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.6■■□□□ 1.21
POLR2J3Q9H1A7 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
POLR2J3Q9H1A7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
POLR2J3Q9H1A7 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
POLR2J3Q9H1A7 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
POLR2J3Q9H1A7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.59■■□□□ 1.21
POLR2J3Q9H1A7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
POLR2J3Q9H1A7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.59■■□□□ 1.21
POLR2J3Q9H1A7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
POLR2J3Q9H1A7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
POLR2J3Q9H1A7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
POLR2J3Q9H1A7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
POLR2J3Q9H1A7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
POLR2J3Q9H1A7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
POLR2J3Q9H1A7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
POLR2J3Q9H1A7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
POLR2J3Q9H1A7 AC008813.1-201ENST00000536597 885 ntBASIC22.58■■□□□ 1.21
POLR2J3Q9H1A7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
POLR2J3Q9H1A7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
POLR2J3Q9H1A7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.57■■□□□ 1.2
POLR2J3Q9H1A7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.57■■□□□ 1.2
POLR2J3Q9H1A7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
POLR2J3Q9H1A7 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
POLR2J3Q9H1A7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.57■■□□□ 1.2
POLR2J3Q9H1A7 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
POLR2J3Q9H1A7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 DUX4L13-201ENST00000554103 1267 ntBASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 DUX4L15-201ENST00000611059 1267 ntBASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 DUX4L23-201ENST00000615195 1269 ntBASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 DUX4L24-201ENST00000617576 1269 ntBASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 DUX4L22-201ENST00000618238 1269 ntBASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 DUX4L20-201ENST00000619712 1269 ntBASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 DUX4L21-201ENST00000622058 1269 ntBASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 DUX4L10-201ENST00000622460 1267 ntBASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 DUX4L25-201ENST00000624915 1269 ntBASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
POLR2J3Q9H1A7 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
POLR2J3Q9H1A7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.55■■□□□ 1.2
POLR2J3Q9H1A7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
POLR2J3Q9H1A7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
POLR2J3Q9H1A7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms