Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
RFFLQ8WZ73 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RFFLQ8WZ73 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.21■■□□□ 1.79
RFFLQ8WZ73 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.21■■□□□ 1.79
RFFLQ8WZ73 AC092803.2-201ENST00000564287 1899 ntBASIC26.21■■□□□ 1.79
RFFLQ8WZ73 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.21■■□□□ 1.79
RFFLQ8WZ73 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.21■■□□□ 1.79
RFFLQ8WZ73 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RFFLQ8WZ73 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RFFLQ8WZ73 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RFFLQ8WZ73 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RFFLQ8WZ73 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RFFLQ8WZ73 DUSP8P4-201ENST00000399538 1761 ntBASIC26.19■■□□□ 1.78
RFFLQ8WZ73 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RFFLQ8WZ73 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RFFLQ8WZ73 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RFFLQ8WZ73 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
RFFLQ8WZ73 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
RFFLQ8WZ73 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
RFFLQ8WZ73 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
RFFLQ8WZ73 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.17■■□□□ 1.78
RFFLQ8WZ73 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RFFLQ8WZ73 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
RFFLQ8WZ73 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.16■■□□□ 1.78
RFFLQ8WZ73 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
RFFLQ8WZ73 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.15■■□□□ 1.78
RFFLQ8WZ73 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.15■■□□□ 1.78
RFFLQ8WZ73 MIR4449-201ENST00000578365 66 ntBASIC26.15■■□□□ 1.78
RFFLQ8WZ73 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
RFFLQ8WZ73 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.14■■□□□ 1.78
RFFLQ8WZ73 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RFFLQ8WZ73 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
RFFLQ8WZ73 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RFFLQ8WZ73 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
RFFLQ8WZ73 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RFFLQ8WZ73 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RFFLQ8WZ73 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RFFLQ8WZ73 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.13■■□□□ 1.77
RFFLQ8WZ73 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.13■■□□□ 1.77
RFFLQ8WZ73 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
RFFLQ8WZ73 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
RFFLQ8WZ73 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RFFLQ8WZ73 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC26.12■■□□□ 1.77
RFFLQ8WZ73 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RFFLQ8WZ73 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.12■■□□□ 1.77
RFFLQ8WZ73 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
RFFLQ8WZ73 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RFFLQ8WZ73 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RFFLQ8WZ73 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RFFLQ8WZ73 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RFFLQ8WZ73 MIR639-201ENST00000384974 98 ntBASIC26.11■■□□□ 1.77
RFFLQ8WZ73 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RFFLQ8WZ73 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.11■■□□□ 1.77
RFFLQ8WZ73 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.1■■□□□ 1.77
RFFLQ8WZ73 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.1■■□□□ 1.77
RFFLQ8WZ73 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RFFLQ8WZ73 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RFFLQ8WZ73 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.09■■□□□ 1.77
RFFLQ8WZ73 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC26.09■■□□□ 1.77
RFFLQ8WZ73 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.09■■□□□ 1.77
RFFLQ8WZ73 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.09■■□□□ 1.77
RFFLQ8WZ73 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.09■■□□□ 1.77
RFFLQ8WZ73 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RFFLQ8WZ73 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RFFLQ8WZ73 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
RFFLQ8WZ73 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.08■■□□□ 1.77
RFFLQ8WZ73 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
RFFLQ8WZ73 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RFFLQ8WZ73 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFFLQ8WZ73 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
RFFLQ8WZ73 AC020928.2-201ENST00000588717 2197 ntBASIC26.07■■□□□ 1.76
RFFLQ8WZ73 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.07■■□□□ 1.76
RFFLQ8WZ73 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFFLQ8WZ73 AC135731.1-201ENST00000569415 2548 ntBASIC26.07■■□□□ 1.76
RFFLQ8WZ73 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFFLQ8WZ73 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.07■■□□□ 1.76
RFFLQ8WZ73 LINC01971-201ENST00000617888 1048 ntBASIC26.07■■□□□ 1.76
RFFLQ8WZ73 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFFLQ8WZ73 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RFFLQ8WZ73 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RFFLQ8WZ73 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RFFLQ8WZ73 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RFFLQ8WZ73 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RFFLQ8WZ73 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.06■■□□□ 1.76
RFFLQ8WZ73 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
RFFLQ8WZ73 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RFFLQ8WZ73 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RFFLQ8WZ73 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
RFFLQ8WZ73 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RFFLQ8WZ73 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC26.05■■□□□ 1.76
RFFLQ8WZ73 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RFFLQ8WZ73 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RFFLQ8WZ73 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
RFFLQ8WZ73 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
RFFLQ8WZ73 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
RFFLQ8WZ73 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RFFLQ8WZ73 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.04■■□□□ 1.76
RFFLQ8WZ73 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
RFFLQ8WZ73 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RFFLQ8WZ73 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms