Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RNF138Q8WVD3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF138Q8WVD3 HSD17B1P1-201ENST00000590052 955 ntBASIC22.65■■□□□ 1.22
RNF138Q8WVD3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
RNF138Q8WVD3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RNF138Q8WVD3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF138Q8WVD3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RNF138Q8WVD3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.64■■□□□ 1.22
RNF138Q8WVD3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
RNF138Q8WVD3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RNF138Q8WVD3 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF138Q8WVD3 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RNF138Q8WVD3 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF138Q8WVD3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RNF138Q8WVD3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.63■■□□□ 1.21
RNF138Q8WVD3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RNF138Q8WVD3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF138Q8WVD3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.62■■□□□ 1.21
RNF138Q8WVD3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RNF138Q8WVD3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RNF138Q8WVD3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.62■■□□□ 1.21
RNF138Q8WVD3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RNF138Q8WVD3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RNF138Q8WVD3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF138Q8WVD3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF138Q8WVD3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RNF138Q8WVD3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF138Q8WVD3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF138Q8WVD3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF138Q8WVD3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF138Q8WVD3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF138Q8WVD3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF138Q8WVD3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RNF138Q8WVD3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.59■■□□□ 1.21
RNF138Q8WVD3 ECEL1P2-201ENST00000461596 1295 ntBASIC22.59■■□□□ 1.21
RNF138Q8WVD3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF138Q8WVD3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.59■■□□□ 1.21
RNF138Q8WVD3 RNF126P1-201ENST00000567452 1320 ntBASIC22.58■■□□□ 1.21
RNF138Q8WVD3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF138Q8WVD3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
RNF138Q8WVD3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.58■■□□□ 1.21
RNF138Q8WVD3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.58■■□□□ 1.21
RNF138Q8WVD3 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF138Q8WVD3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
RNF138Q8WVD3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF138Q8WVD3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.57■■□□□ 1.2
RNF138Q8WVD3 AC025884.2-201ENST00000553429 711 ntBASIC22.57■■□□□ 1.2
RNF138Q8WVD3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF138Q8WVD3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF138Q8WVD3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF138Q8WVD3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF138Q8WVD3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.56■■□□□ 1.2
RNF138Q8WVD3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF138Q8WVD3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF138Q8WVD3 AC142472.1-201ENST00000612013 1741 ntBASIC22.54■■□□□ 1.2
RNF138Q8WVD3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF138Q8WVD3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF138Q8WVD3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF138Q8WVD3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF138Q8WVD3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF138Q8WVD3 AL359504.2-201ENST00000605506 1601 ntBASIC22.53■■□□□ 1.2
RNF138Q8WVD3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF138Q8WVD3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.53■■□□□ 1.2
RNF138Q8WVD3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF138Q8WVD3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF138Q8WVD3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF138Q8WVD3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.52■■□□□ 1.2
RNF138Q8WVD3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RNF138Q8WVD3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
RNF138Q8WVD3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF138Q8WVD3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF138Q8WVD3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.19
RNF138Q8WVD3 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF138Q8WVD3 RARRES2P2-201ENST00000394842 485 ntBASIC22.51■■□□□ 1.19
RNF138Q8WVD3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF138Q8WVD3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.51■■□□□ 1.19
RNF138Q8WVD3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.51■■□□□ 1.19
RNF138Q8WVD3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF138Q8WVD3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF138Q8WVD3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
RNF138Q8WVD3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RNF138Q8WVD3 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF138Q8WVD3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.5■■□□□ 1.19
RNF138Q8WVD3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.5■■□□□ 1.19
RNF138Q8WVD3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF138Q8WVD3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF138Q8WVD3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF138Q8WVD3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
RNF138Q8WVD3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF138Q8WVD3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
RNF138Q8WVD3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.48■■□□□ 1.19
RNF138Q8WVD3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.48■■□□□ 1.19
RNF138Q8WVD3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
RNF138Q8WVD3 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF138Q8WVD3 AL121749.1-202ENST00000609313 2153 ntBASIC22.48■■□□□ 1.19
RNF138Q8WVD3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF138Q8WVD3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF138Q8WVD3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.47■■□□□ 1.19
RNF138Q8WVD3 AP004609.3-201ENST00000610705 1884 ntBASIC22.47■■□□□ 1.19
RNF138Q8WVD3 SMPD5-203ENST00000639008 1464 ntBASIC22.47■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms