Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC37.88■■■■□ 3.65
ARHGEF40Q8TER5 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
ARHGEF40Q8TER5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC37.87■■■■□ 3.65
ARHGEF40Q8TER5 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
ARHGEF40Q8TER5 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC37.86■■■■□ 3.65
ARHGEF40Q8TER5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
ARHGEF40Q8TER5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
ARHGEF40Q8TER5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC37.85■■■■□ 3.65
ARHGEF40Q8TER5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
ARHGEF40Q8TER5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC37.84■■■■□ 3.65
ARHGEF40Q8TER5 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC37.83■■■■□ 3.65
ARHGEF40Q8TER5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC37.83■■■■□ 3.65
ARHGEF40Q8TER5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC37.82■■■■□ 3.65
ARHGEF40Q8TER5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC37.82■■■■□ 3.64
ARHGEF40Q8TER5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC37.82■■■■□ 3.64
ARHGEF40Q8TER5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC37.82■■■■□ 3.64
ARHGEF40Q8TER5 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC37.82■■■■□ 3.64
ARHGEF40Q8TER5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
ARHGEF40Q8TER5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
ARHGEF40Q8TER5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC37.81■■■■□ 3.64
ARHGEF40Q8TER5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC37.81■■■■□ 3.64
ARHGEF40Q8TER5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC37.8■■■■□ 3.64
ARHGEF40Q8TER5 MIR3960-201ENST00000583311 91 ntBASIC37.8■■■■□ 3.64
ARHGEF40Q8TER5 AL135925.1-201ENST00000605920 1701 ntBASIC37.79■■■■□ 3.64
ARHGEF40Q8TER5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC37.79■■■■□ 3.64
ARHGEF40Q8TER5 MIR638-201ENST00000385237 100 ntBASIC37.77■■■■□ 3.64
ARHGEF40Q8TER5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
ARHGEF40Q8TER5 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC37.77■■■■□ 3.64
ARHGEF40Q8TER5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC37.77■■■■□ 3.64
ARHGEF40Q8TER5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC37.77■■■■□ 3.64
ARHGEF40Q8TER5 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC37.76■■■■□ 3.64
ARHGEF40Q8TER5 RNF146-205ENST00000477776 762 ntTSL 3 BASIC37.76■■■■□ 3.63
ARHGEF40Q8TER5 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC37.75■■■■□ 3.63
ARHGEF40Q8TER5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC37.75■■■■□ 3.63
ARHGEF40Q8TER5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC37.75■■■■□ 3.63
ARHGEF40Q8TER5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
ARHGEF40Q8TER5 AC008406.3-201ENST00000620001 1374 ntBASIC37.74■■■■□ 3.63
ARHGEF40Q8TER5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC37.73■■■■□ 3.63
ARHGEF40Q8TER5 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
ARHGEF40Q8TER5 CREM-229ENST00000474362 1030 ntTSL 2 BASIC37.73■■■■□ 3.63
ARHGEF40Q8TER5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC37.73■■■■□ 3.63
ARHGEF40Q8TER5 GRAMD4P7-201ENST00000578182 1232 ntBASIC37.73■■■■□ 3.63
ARHGEF40Q8TER5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC37.72■■■■□ 3.63
ARHGEF40Q8TER5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC37.72■■■■□ 3.63
ARHGEF40Q8TER5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC37.72■■■■□ 3.63
ARHGEF40Q8TER5 Z92544.1-202ENST00000571933 1220 ntBASIC37.71■■■■□ 3.63
ARHGEF40Q8TER5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
ARHGEF40Q8TER5 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC37.71■■■■□ 3.63
ARHGEF40Q8TER5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC37.71■■■■□ 3.63
ARHGEF40Q8TER5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC37.7■■■■□ 3.63
ARHGEF40Q8TER5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC37.7■■■■□ 3.63
ARHGEF40Q8TER5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC37.69■■■■□ 3.62
ARHGEF40Q8TER5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
ARHGEF40Q8TER5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC37.69■■■■□ 3.62
ARHGEF40Q8TER5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC37.69■■■■□ 3.62
ARHGEF40Q8TER5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC37.69■■■■□ 3.62
ARHGEF40Q8TER5 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC37.69■■■■□ 3.62
ARHGEF40Q8TER5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
ARHGEF40Q8TER5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
ARHGEF40Q8TER5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC37.68■■■■□ 3.62
ARHGEF40Q8TER5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC37.67■■■■□ 3.62
ARHGEF40Q8TER5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC37.66■■■■□ 3.62
ARHGEF40Q8TER5 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC37.66■■■■□ 3.62
ARHGEF40Q8TER5 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC37.66■■■■□ 3.62
ARHGEF40Q8TER5 AC239859.2-201ENST00000444165 318 ntBASIC37.65■■■■□ 3.62
ARHGEF40Q8TER5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC37.64■■■■□ 3.62
ARHGEF40Q8TER5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC37.64■■■■□ 3.62
ARHGEF40Q8TER5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC37.64■■■■□ 3.62
ARHGEF40Q8TER5 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC37.64■■■■□ 3.62
ARHGEF40Q8TER5 AC018755.3-202ENST00000596210 929 ntBASIC37.63■■■■□ 3.61
ARHGEF40Q8TER5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC37.63■■■■□ 3.61
ARHGEF40Q8TER5 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC37.63■■■■□ 3.61
ARHGEF40Q8TER5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC37.63■■■■□ 3.61
ARHGEF40Q8TER5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
ARHGEF40Q8TER5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC37.62■■■■□ 3.61
ARHGEF40Q8TER5 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC37.62■■■■□ 3.61
ARHGEF40Q8TER5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC37.61■■■■□ 3.61
ARHGEF40Q8TER5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC37.61■■■■□ 3.61
ARHGEF40Q8TER5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC37.61■■■■□ 3.61
ARHGEF40Q8TER5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC37.61■■■■□ 3.61
ARHGEF40Q8TER5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
ARHGEF40Q8TER5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
ARHGEF40Q8TER5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC37.59■■■■□ 3.61
ARHGEF40Q8TER5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC37.58■■■■□ 3.61
ARHGEF40Q8TER5 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC37.58■■■■□ 3.61
ARHGEF40Q8TER5 AC019171.1-201ENST00000601251 1056 ntBASIC37.57■■■■□ 3.61
ARHGEF40Q8TER5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC37.57■■■■□ 3.6
ARHGEF40Q8TER5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC37.56■■■■□ 3.6
ARHGEF40Q8TER5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC37.56■■■■□ 3.6
ARHGEF40Q8TER5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
ARHGEF40Q8TER5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC37.56■■■■□ 3.6
ARHGEF40Q8TER5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC37.55■■■■□ 3.6
ARHGEF40Q8TER5 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC37.55■■■■□ 3.6
ARHGEF40Q8TER5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
ARHGEF40Q8TER5 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC37.53■■■■□ 3.6
ARHGEF40Q8TER5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC37.52■■■■□ 3.6
ARHGEF40Q8TER5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
ARHGEF40Q8TER5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
ARHGEF40Q8TER5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC37.52■■■■□ 3.6
ARHGEF40Q8TER5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC37.51■■■■□ 3.59
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms