Protein–RNA interactions for Protein: Q8TCA0

LRRC20, Leucine-rich repeat-containing protein 20, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC20Q8TCA0 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRC20Q8TCA0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LRRC20Q8TCA0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC20Q8TCA0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRC20Q8TCA0 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC20Q8TCA0 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC20Q8TCA0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LRRC20Q8TCA0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRC20Q8TCA0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LRRC20Q8TCA0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.59■□□□□ 0.89
LRRC20Q8TCA0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC20Q8TCA0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC20Q8TCA0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC20Q8TCA0 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC20Q8TCA0 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LRRC20Q8TCA0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.58■□□□□ 0.88
LRRC20Q8TCA0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LRRC20Q8TCA0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRC20Q8TCA0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
LRRC20Q8TCA0 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC20Q8TCA0 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC20Q8TCA0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC20.57■□□□□ 0.88
LRRC20Q8TCA0 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LRRC20Q8TCA0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC20Q8TCA0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LRRC20Q8TCA0 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.56■□□□□ 0.88
LRRC20Q8TCA0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC20Q8TCA0 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC20Q8TCA0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.56■□□□□ 0.88
LRRC20Q8TCA0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC20Q8TCA0 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LRRC20Q8TCA0 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LRRC20Q8TCA0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.55■□□□□ 0.88
LRRC20Q8TCA0 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC20Q8TCA0 AL031258.1-201ENST00000623562 325 ntBASIC20.55■□□□□ 0.88
LRRC20Q8TCA0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC20Q8TCA0 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRRC20Q8TCA0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC20Q8TCA0 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC20Q8TCA0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC20Q8TCA0 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.54■□□□□ 0.88
LRRC20Q8TCA0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LRRC20Q8TCA0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC20Q8TCA0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC20Q8TCA0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.53■□□□□ 0.88
LRRC20Q8TCA0 AP002365.1-201ENST00000603448 772 ntBASIC20.53■□□□□ 0.88
LRRC20Q8TCA0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC20Q8TCA0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC20Q8TCA0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC20Q8TCA0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC20Q8TCA0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC20Q8TCA0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC20Q8TCA0 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
LRRC20Q8TCA0 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.52■□□□□ 0.87
LRRC20Q8TCA0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC20Q8TCA0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC20Q8TCA0 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LRRC20Q8TCA0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC20Q8TCA0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC20Q8TCA0 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC20Q8TCA0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
LRRC20Q8TCA0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC20Q8TCA0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC20Q8TCA0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC20Q8TCA0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC20Q8TCA0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LRRC20Q8TCA0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC20Q8TCA0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LRRC20Q8TCA0 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.49■□□□□ 0.87
LRRC20Q8TCA0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC20Q8TCA0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC20Q8TCA0 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC20Q8TCA0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC20Q8TCA0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC20Q8TCA0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC20Q8TCA0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC20Q8TCA0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC20Q8TCA0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC20Q8TCA0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
LRRC20Q8TCA0 AL024507.2-201ENST00000606070 2574 ntBASIC20.47■□□□□ 0.87
LRRC20Q8TCA0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC20Q8TCA0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
LRRC20Q8TCA0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.46■□□□□ 0.87
LRRC20Q8TCA0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC20Q8TCA0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.46■□□□□ 0.87
LRRC20Q8TCA0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC20Q8TCA0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LRRC20Q8TCA0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC20Q8TCA0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.45■□□□□ 0.86
LRRC20Q8TCA0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC20Q8TCA0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC20Q8TCA0 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC20Q8TCA0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC20Q8TCA0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC20Q8TCA0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC20Q8TCA0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC20Q8TCA0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
LRRC20Q8TCA0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
LRRC20Q8TCA0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
LRRC20Q8TCA0 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms