Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
SNIP1Q8TAD8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
SNIP1Q8TAD8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
SNIP1Q8TAD8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SNIP1Q8TAD8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.57■■□□□ 1.36
SNIP1Q8TAD8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.57■■□□□ 1.36
SNIP1Q8TAD8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
SNIP1Q8TAD8 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SNIP1Q8TAD8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
SNIP1Q8TAD8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.56■■□□□ 1.36
SNIP1Q8TAD8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.56■■□□□ 1.36
SNIP1Q8TAD8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.56■■□□□ 1.36
SNIP1Q8TAD8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SNIP1Q8TAD8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.56■■□□□ 1.36
SNIP1Q8TAD8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 MIR935-201ENST00000401179 91 ntBASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 MIR3960-201ENST00000583311 91 ntBASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 AC018755.3-202ENST00000596210 929 ntBASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SNIP1Q8TAD8 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNIP1Q8TAD8 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNIP1Q8TAD8 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNIP1Q8TAD8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.54■■□□□ 1.36
SNIP1Q8TAD8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNIP1Q8TAD8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.54■■□□□ 1.36
SNIP1Q8TAD8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.54■■□□□ 1.36
SNIP1Q8TAD8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNIP1Q8TAD8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SNIP1Q8TAD8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.54■■□□□ 1.36
SNIP1Q8TAD8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
SNIP1Q8TAD8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.53■■□□□ 1.36
SNIP1Q8TAD8 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.53■■□□□ 1.36
SNIP1Q8TAD8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.53■■□□□ 1.36
SNIP1Q8TAD8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNIP1Q8TAD8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SNIP1Q8TAD8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.52■■□□□ 1.36
SNIP1Q8TAD8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.52■■□□□ 1.36
SNIP1Q8TAD8 AL031848.2-201ENST00000607670 837 ntBASIC23.52■■□□□ 1.36
SNIP1Q8TAD8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.52■■□□□ 1.36
SNIP1Q8TAD8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.51■■□□□ 1.35
SNIP1Q8TAD8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNIP1Q8TAD8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.51■■□□□ 1.35
SNIP1Q8TAD8 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.51■■□□□ 1.35
SNIP1Q8TAD8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SNIP1Q8TAD8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.5■■□□□ 1.35
SNIP1Q8TAD8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNIP1Q8TAD8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SNIP1Q8TAD8 AC103724.3-201ENST00000564481 992 ntBASIC23.5■■□□□ 1.35
SNIP1Q8TAD8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
SNIP1Q8TAD8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SNIP1Q8TAD8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.49■■□□□ 1.35
SNIP1Q8TAD8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC23.49■■□□□ 1.35
SNIP1Q8TAD8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.48■■□□□ 1.35
SNIP1Q8TAD8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SNIP1Q8TAD8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
SNIP1Q8TAD8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SNIP1Q8TAD8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SNIP1Q8TAD8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SNIP1Q8TAD8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
SNIP1Q8TAD8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.46■■□□□ 1.35
SNIP1Q8TAD8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
SNIP1Q8TAD8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
SNIP1Q8TAD8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.45■■□□□ 1.34
SNIP1Q8TAD8 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.45■■□□□ 1.34
SNIP1Q8TAD8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
SNIP1Q8TAD8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
SNIP1Q8TAD8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.44■■□□□ 1.34
SNIP1Q8TAD8 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SNIP1Q8TAD8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SNIP1Q8TAD8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SNIP1Q8TAD8 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SNIP1Q8TAD8 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SNIP1Q8TAD8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.43■■□□□ 1.34
SNIP1Q8TAD8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.43■■□□□ 1.34
SNIP1Q8TAD8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
SNIP1Q8TAD8 AP004833.2-201ENST00000532228 1454 ntBASIC23.42■■□□□ 1.34
SNIP1Q8TAD8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC23.41■■□□□ 1.34
SNIP1Q8TAD8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
SNIP1Q8TAD8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.41■■□□□ 1.34
SNIP1Q8TAD8 AC008406.3-201ENST00000620001 1374 ntBASIC23.4■■□□□ 1.34
SNIP1Q8TAD8 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
SNIP1Q8TAD8 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SNIP1Q8TAD8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
SNIP1Q8TAD8 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SNIP1Q8TAD8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
SNIP1Q8TAD8 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.39■■□□□ 1.33
SNIP1Q8TAD8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.39■■□□□ 1.33
SNIP1Q8TAD8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SNIP1Q8TAD8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
SNIP1Q8TAD8 AC239859.2-201ENST00000444165 318 ntBASIC23.38■■□□□ 1.33
SNIP1Q8TAD8 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SNIP1Q8TAD8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms