Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 ECEL1P2-201ENST00000461596 1295 ntBASIC28.99■■■□□ 2.23
PNMA1Q8ND90 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.98■■■□□ 2.23
PNMA1Q8ND90 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
PNMA1Q8ND90 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
PNMA1Q8ND90 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.97■■■□□ 2.23
PNMA1Q8ND90 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
PNMA1Q8ND90 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
PNMA1Q8ND90 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.96■■■□□ 2.23
PNMA1Q8ND90 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.96■■■□□ 2.23
PNMA1Q8ND90 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.96■■■□□ 2.23
PNMA1Q8ND90 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
PNMA1Q8ND90 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PNMA1Q8ND90 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.96■■■□□ 2.23
PNMA1Q8ND90 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
PNMA1Q8ND90 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PNMA1Q8ND90 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
PNMA1Q8ND90 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.95■■■□□ 2.22
PNMA1Q8ND90 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
PNMA1Q8ND90 AL449106.1-201ENST00000608517 1980 ntBASIC28.94■■■□□ 2.22
PNMA1Q8ND90 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
PNMA1Q8ND90 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
PNMA1Q8ND90 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.94■■■□□ 2.22
PNMA1Q8ND90 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.94■■■□□ 2.22
PNMA1Q8ND90 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PNMA1Q8ND90 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PNMA1Q8ND90 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
PNMA1Q8ND90 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PNMA1Q8ND90 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PNMA1Q8ND90 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PNMA1Q8ND90 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
PNMA1Q8ND90 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PNMA1Q8ND90 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.91■■■□□ 2.22
PNMA1Q8ND90 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.9■■■□□ 2.22
PNMA1Q8ND90 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.9■■■□□ 2.22
PNMA1Q8ND90 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.89■■■□□ 2.21
PNMA1Q8ND90 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.89■■■□□ 2.21
PNMA1Q8ND90 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PNMA1Q8ND90 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PNMA1Q8ND90 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.88■■■□□ 2.21
PNMA1Q8ND90 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PNMA1Q8ND90 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.87■■■□□ 2.21
PNMA1Q8ND90 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PNMA1Q8ND90 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PNMA1Q8ND90 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
PNMA1Q8ND90 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PNMA1Q8ND90 ABHD17AP5-201ENST00000580133 923 ntBASIC28.87■■■□□ 2.21
PNMA1Q8ND90 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
PNMA1Q8ND90 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
PNMA1Q8ND90 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PNMA1Q8ND90 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.86■■■□□ 2.21
PNMA1Q8ND90 AC025884.2-201ENST00000553429 711 ntBASIC28.86■■■□□ 2.21
PNMA1Q8ND90 AL359504.2-201ENST00000605506 1601 ntBASIC28.86■■■□□ 2.21
PNMA1Q8ND90 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PNMA1Q8ND90 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PNMA1Q8ND90 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
PNMA1Q8ND90 SMPD5-203ENST00000639008 1464 ntBASIC28.85■■■□□ 2.21
PNMA1Q8ND90 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.85■■■□□ 2.21
PNMA1Q8ND90 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PNMA1Q8ND90 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.85■■■□□ 2.21
PNMA1Q8ND90 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.84■■■□□ 2.21
PNMA1Q8ND90 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
PNMA1Q8ND90 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.83■■■□□ 2.21
PNMA1Q8ND90 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.82■■■□□ 2.2
PNMA1Q8ND90 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
PNMA1Q8ND90 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.81■■■□□ 2.2
PNMA1Q8ND90 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PNMA1Q8ND90 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.81■■■□□ 2.2
PNMA1Q8ND90 AC007029.1-201ENST00000604183 313 ntBASIC28.81■■■□□ 2.2
PNMA1Q8ND90 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PNMA1Q8ND90 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.8■■■□□ 2.2
PNMA1Q8ND90 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PNMA1Q8ND90 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PNMA1Q8ND90 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.8■■■□□ 2.2
PNMA1Q8ND90 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
PNMA1Q8ND90 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.8■■■□□ 2.2
PNMA1Q8ND90 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
PNMA1Q8ND90 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.78■■■□□ 2.2
PNMA1Q8ND90 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.78■■■□□ 2.2
PNMA1Q8ND90 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
PNMA1Q8ND90 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.77■■■□□ 2.2
PNMA1Q8ND90 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.77■■■□□ 2.2
PNMA1Q8ND90 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.76■■■□□ 2.19
PNMA1Q8ND90 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.75■■■□□ 2.19
PNMA1Q8ND90 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
PNMA1Q8ND90 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PNMA1Q8ND90 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PNMA1Q8ND90 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
PNMA1Q8ND90 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PNMA1Q8ND90 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.74■■■□□ 2.19
PNMA1Q8ND90 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.73■■■□□ 2.19
PNMA1Q8ND90 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PNMA1Q8ND90 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PNMA1Q8ND90 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
PNMA1Q8ND90 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
PNMA1Q8ND90 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
PNMA1Q8ND90 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
PNMA1Q8ND90 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
PNMA1Q8ND90 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PNMA1Q8ND90 U85056.1-201ENST00000616429 682 ntBASIC28.72■■■□□ 2.19
PNMA1Q8ND90 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms