Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
SMRP1Q8NCR6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMRP1Q8NCR6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMRP1Q8NCR6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
SMRP1Q8NCR6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.16■■□□□ 1.78
SMRP1Q8NCR6 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMRP1Q8NCR6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
SMRP1Q8NCR6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMRP1Q8NCR6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.15■■□□□ 1.78
SMRP1Q8NCR6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC26.15■■□□□ 1.78
SMRP1Q8NCR6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SMRP1Q8NCR6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.14■■□□□ 1.78
SMRP1Q8NCR6 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.14■■□□□ 1.78
SMRP1Q8NCR6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.14■■□□□ 1.78
SMRP1Q8NCR6 AL356441.2-201ENST00000443009 864 ntBASIC26.14■■□□□ 1.78
SMRP1Q8NCR6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMRP1Q8NCR6 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
SMRP1Q8NCR6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.14■■□□□ 1.78
SMRP1Q8NCR6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SMRP1Q8NCR6 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.14■■□□□ 1.78
SMRP1Q8NCR6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMRP1Q8NCR6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC26.14■■□□□ 1.77
SMRP1Q8NCR6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMRP1Q8NCR6 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMRP1Q8NCR6 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.13■■□□□ 1.77
SMRP1Q8NCR6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.12■■□□□ 1.77
SMRP1Q8NCR6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMRP1Q8NCR6 AC100797.4-201ENST00000631653 1827 ntBASIC26.11■■□□□ 1.77
SMRP1Q8NCR6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SMRP1Q8NCR6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SMRP1Q8NCR6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.11■■□□□ 1.77
SMRP1Q8NCR6 AC103724.3-201ENST00000564481 992 ntBASIC26.11■■□□□ 1.77
SMRP1Q8NCR6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.11■■□□□ 1.77
SMRP1Q8NCR6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.1■■□□□ 1.77
SMRP1Q8NCR6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.1■■□□□ 1.77
SMRP1Q8NCR6 AL031848.2-201ENST00000607670 837 ntBASIC26.1■■□□□ 1.77
SMRP1Q8NCR6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.1■■□□□ 1.77
SMRP1Q8NCR6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMRP1Q8NCR6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMRP1Q8NCR6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMRP1Q8NCR6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.09■■□□□ 1.77
SMRP1Q8NCR6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SMRP1Q8NCR6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SMRP1Q8NCR6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
SMRP1Q8NCR6 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
SMRP1Q8NCR6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SMRP1Q8NCR6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
SMRP1Q8NCR6 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SMRP1Q8NCR6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.06■■□□□ 1.76
SMRP1Q8NCR6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SMRP1Q8NCR6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.05■■□□□ 1.76
SMRP1Q8NCR6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
SMRP1Q8NCR6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.05■■□□□ 1.76
SMRP1Q8NCR6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SMRP1Q8NCR6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.04■■□□□ 1.76
SMRP1Q8NCR6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMRP1Q8NCR6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.04■■□□□ 1.76
SMRP1Q8NCR6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMRP1Q8NCR6 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SMRP1Q8NCR6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMRP1Q8NCR6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.03■■□□□ 1.76
SMRP1Q8NCR6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SMRP1Q8NCR6 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
SMRP1Q8NCR6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMRP1Q8NCR6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SMRP1Q8NCR6 MIR935-201ENST00000401179 91 ntBASIC26.01■■□□□ 1.75
SMRP1Q8NCR6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.01■■□□□ 1.75
SMRP1Q8NCR6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.01■■□□□ 1.75
SMRP1Q8NCR6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMRP1Q8NCR6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMRP1Q8NCR6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
SMRP1Q8NCR6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMRP1Q8NCR6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
SMRP1Q8NCR6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
SMRP1Q8NCR6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMRP1Q8NCR6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMRP1Q8NCR6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC25.98■■□□□ 1.75
SMRP1Q8NCR6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
SMRP1Q8NCR6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMRP1Q8NCR6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.98■■□□□ 1.75
SMRP1Q8NCR6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMRP1Q8NCR6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
SMRP1Q8NCR6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.97■■□□□ 1.75
SMRP1Q8NCR6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMRP1Q8NCR6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SMRP1Q8NCR6 RNF146-205ENST00000477776 762 ntTSL 3 BASIC25.97■■□□□ 1.75
SMRP1Q8NCR6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.97■■□□□ 1.75
SMRP1Q8NCR6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMRP1Q8NCR6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMRP1Q8NCR6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
SMRP1Q8NCR6 AC019171.1-201ENST00000601251 1056 ntBASIC25.96■■□□□ 1.75
SMRP1Q8NCR6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMRP1Q8NCR6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.95■■□□□ 1.75
SMRP1Q8NCR6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
SMRP1Q8NCR6 AC239859.2-201ENST00000444165 318 ntBASIC25.95■■□□□ 1.74
SMRP1Q8NCR6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC25.95■■□□□ 1.74
SMRP1Q8NCR6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC25.95■■□□□ 1.74
SMRP1Q8NCR6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SMRP1Q8NCR6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SMRP1Q8NCR6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC25.94■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms